Searched refs:ajSeqGetBegin (Results 1 – 25 of 49) sorted by relevance
12
| /dports/biology/emboss/EMBOSS-6.6.0/emboss/ |
| H A D | origsplitter.c | 145 ajStrFromInt(&value, ajSeqGetBegin(seq)+start); in origsplitter_write()
148 ajStrFromInt(&value, ajSeqGetBegin(seq)+end); in origsplitter_write()
|
| H A D | water.c | 108 begina=ajSeqGetBegin(a)+ajSeqGetOffset(a); in main()
132 beginb=ajSeqGetBegin(b)+ajSeqGetOffset(b); in main()
|
| H A D | vectorstrip.c | 639 ajSeqGetBegin(sequence), in vectorstrip_process_hits()
642 ajSeqGetBegin(sequence), in vectorstrip_process_hits()
661 ajSeqGetBegin(sequence), in vectorstrip_process_hits()
664 ajSeqGetBegin(sequence), in vectorstrip_process_hits()
720 begin = ajSeqGetBegin(sequence); in vectorstrip_scan_sequence()
|
| H A D | splitter.c | 173 ajStrFromUint(&value, ajSeqGetBegin(seq)+start); in splitter_MakeSubSeqName()
176 ajStrFromUint(&value, ajSeqGetBegin(seq)+end); in splitter_MakeSubSeqName()
|
| H A D | cutseq.c | 51 beg = ajSeqGetBegin(seq)-1; in main()
|
| H A D | splitsource.c | 168 ajStrFromUint(&value, ajSeqGetBegin(seq)+start); in splitsource_MakeSubSeqName()
171 ajStrFromUint(&value, ajSeqGetBegin(seq)+end); in splitsource_MakeSubSeqName()
|
| H A D | backtranseq.c | 54 beg = ajSeqGetBegin(a); in main()
|
| H A D | primersearch.c | 610 ajSeqGetBegin(seq), in primersearch_scan_seq()
631 ajSeqGetBegin(seq), in primersearch_scan_seq()
654 ajSeqGetBegin(seq), in primersearch_scan_seq()
675 ajSeqGetBegin(seq), in primersearch_scan_seq()
|
| H A D | maskseq.c | 53 beg = ajSeqGetBegin(seq)-1; in main()
|
| H A D | backtranambig.c | 60 beg = ajSeqGetBegin(a); in main()
|
| H A D | dreg.c | 65 ajSeqGetBegin(seq), ajSeqGetEnd(seq), ajSeqGetLen(seq), in main()
|
| H A D | dottup.c | 106 begin1 = ajSeqGetBegin(seq1); in main()
107 begin2 = ajSeqGetBegin(seq2); in main()
|
| H A D | sixpack.c | 117 begin = ajSeqGetBegin(seq)-1; in main()
219 pepbegin = ajSeqGetBegin(pep)-1; in main()
|
| H A D | chaos.c | 63 begin = ajSeqGetBegin(sequence) - 1; in main()
|
| H A D | btwisted.c | 82 begin = ajSeqGetBegin(seq); in main()
|
| H A D | dotmatcher.c | 166 b1 = ajSeqGetBegin(seq); in main()
167 b2 = ajSeqGetBegin(seq2); in main()
|
| H A D | merger.c | 118 begina = ajSeqGetBegin(a); in main()
119 beginb = ajSeqGetBegin(b); in main()
|
| H A D | isochore.c | 136 ibeg = ajSeqGetBegin(seq); in main()
|
| H A D | pepnet.c | 113 begin = ajSeqGetBegin(seq); in main()
|
| H A D | equicktandem.c | 106 begin = ajSeqGetBegin(sequence) - 1; in main()
|
| H A D | pepwheel.c | 132 begin = ajSeqGetBegin(seq); in main()
|
| H A D | checktrans.c | 87 begin = ajSeqGetBegin(seq); in main()
|
| H A D | syco.c | 112 beg = ajSeqGetBegin(a); in main()
|
| H A D | plotorf.c | 89 beg = ajSeqGetBegin(seq); in main()
|
| H A D | pepwindow.c | 81 istart = ajSeqGetBegin(seq) - 1; in main()
|
12