Home
last modified time | relevance | path

Searched refs:ajStrAppendS (Results 1 – 25 of 106) sorted by relevance

12345

/dports/biology/emboss/EMBOSS-6.6.0/ajax/core/
H A Dajfiledata.c203 ajStrAppendS(&filedataHomeTmp,filedataBaseTmp); in ajDatafileNewInNameS()
328 ajStrAppendS(&filedataBaseTmp, name); in ajDatafileNewInNamePathS()
417 ajStrAppendS(&filedataNameDataTmp,path); in ajDatafileNewInNamePathS()
421 ajStrAppendS(&filedataNameDataTmp,name); in ajDatafileNewInNamePathS()
446 ajStrAppendS(&filedataNameDataTmp,path); in ajDatafileNewInNamePathS()
450 ajStrAppendS(&filedataNameDataTmp,name); in ajDatafileNewInNamePathS()
471 ajStrAppendS(&filedataNameDataTmp,path); in ajDatafileNewInNamePathS()
475 ajStrAppendS(&filedataNameDataTmp,name); in ajDatafileNewInNamePathS()
524 ajStrAppendS(&filedataNameDataTmp,name); in ajDatafileNewOutNameS()
548 ajStrAppendS(&filedataNameDataTmp,name); in ajDatafileNewOutNameS()
[all …]
H A Dajseqtype.c1551 ajStrAppendS(&regstr, tmpstr); in seqTypeCharAny()
1587 ajStrAppendS(&regstr, tmpstr); in seqTypeCharAnyGap()
1590 ajStrAppendS(&regstr, tmpstr); in seqTypeCharAnyGap()
1627 ajStrAppendS(&regstr, tmpstr); in seqTypeCharNuc()
1663 ajStrAppendS(&regstr, tmpstr); in seqTypeCharNucGap()
1666 ajStrAppendS(&regstr, tmpstr); in seqTypeCharNucGap()
1704 ajStrAppendS(&regstr, tmpstr); in seqTypeCharNucGapPhylo()
1743 ajStrAppendS(&regstr, tmpstr); in seqTypeCharNucPure()
1781 ajStrAppendS(&regstr, tmpstr); in seqTypeCharProt()
1819 ajStrAppendS(&regstr, tmpstr); in seqTypeCharProtGap()
[all …]
H A Dajvarwrite.c758 ajStrAppendS(&str, vardata->Id); in varoutWriteBcf()
760 ajStrAppendS(&str, vardata->Ref); in varoutWriteBcf()
762 ajStrAppendS(&str,vardata->Alt); in varoutWriteBcf()
764 ajStrAppendS(&str,vardata->Filter); in varoutWriteBcf()
766 ajStrAppendS(&str,vardata->Info); in varoutWriteBcf()
768 ajStrAppendS(&str,vardata->Format); in varoutWriteBcf()
1041 ajStrAppendS(&str, vardata->Id); in varoutWriteNextBcf()
1043 ajStrAppendS(&str, vardata->Ref); in varoutWriteNextBcf()
1045 ajStrAppendS(&str,vardata->Alt); in varoutWriteNextBcf()
1047 ajStrAppendS(&str,vardata->Filter); in varoutWriteNextBcf()
[all …]
H A Dajnam.c1845 ajStrAppendS(methods, attrval); in ajNamSvrDetails()
1858 ajStrAppendS(methods, attrval); in ajNamSvrDetails()
1875 ajStrAppendS(methods, attrval); in ajNamSvrDetails()
1889 ajStrAppendS(methods, attrval); in ajNamSvrDetails()
2570 ajStrAppendS(methods, attrval); in ajNamDbDetails()
2583 ajStrAppendS(methods, attrval); in ajNamDbDetails()
2600 ajStrAppendS(methods, attrval); in ajNamDbDetails()
2614 ajStrAppendS(methods, attrval); in ajNamDbDetails()
3898 ajStrAppendS(&value,curword); in namListParse()
5462 ajStrAppendS(&value,curword); in namSvrCacheParseList()
[all …]
H A Dajtranslate.c301 ajStrAppendS(&trnFileName, value); in ajTrnNewI()
454 ajStrAppendS(&trnText, trnLine); in ajTrnReadFile()
665 ajStrAppendS(&name, value); in ajTrnNewPep()
879 ajStrAppendS(pep, transtr); in ajTrnSeqC()
946 ajStrAppendS(pep, transtr); in ajTrnSeqInitC()
1002 ajStrAppendS(pep, transtr); in ajTrnSeqRevC()
1076 ajStrAppendS(pep, transtr); in ajTrnSeqRevinitC()
H A Dajpat.c803 ajStrAppendS (&pat,line); in ajPatlistSeqRead()
840 ajStrAppendS (&pat,line); in ajPatlistSeqRead()
941 ajStrAppendS (&pat,line); in ajPatlistRegexRead()
980 ajStrAppendS (&pat,line); in ajPatlistRegexRead()
/dports/biology/emboss/EMBOSS-6.6.0/emboss/
H A Demma.c240 ajStrAppendS(&cmd, tmpFilename); in main()
278 ajStrAppendS(&cmd, tmp); in main()
308 ajStrAppendS(&cmd, pwmstr); in main()
313 ajStrAppendS(&cmd, pwdstr); in main()
354 ajStrAppendS(&cmd, m1str); in main()
359 ajStrAppendS(&cmd, m2str); in main()
365 ajStrAppendS(&cmd, tmp); in main()
368 ajStrAppendS(&cmd, tmp); in main()
371 ajStrAppendS(&cmd, tmp); in main()
373 ajStrAppendS(&cmd, hgapres); in main()
[all …]
H A Dcutgextract.c374 ajStrAppendS(&cutgextractOrg, token); in cutgextract_next()
386 ajStrAppendS(pdoc, token); in cutgextract_next()
391 ajStrAppendS(pdoc, token); in cutgextract_next()
396 ajStrAppendS(pdoc, token); in cutgextract_next()
401 ajStrAppendS(pdoc, token); in cutgextract_next()
406 ajStrAppendS(pdoc, token); in cutgextract_next()
412 ajStrAppendS(pdoc, token); in cutgextract_next()
417 ajStrAppendS(pdoc, token); in cutgextract_next()
H A Dextractfeat.c394 ajStrAppendS(&name, ajSeqGetNameS(seq)); in extractfeat_WriteOut()
398 ajStrAppendS(&name, value); in extractfeat_WriteOut()
401 ajStrAppendS(&name, value); in extractfeat_WriteOut()
407 ajStrAppendS(&name, type); in extractfeat_WriteOut()
415 ajStrAppendS(&desc, type); in extractfeat_WriteOut()
418 ajStrAppendS(&desc, describestr); in extractfeat_WriteOut()
420 ajStrAppendS(&desc, ajSeqGetDescS(seq)); in extractfeat_WriteOut()
672 ajStrAppendS(featstr, result); in extractfeat_GetRegionPad()
961 ajStrAppendS(strout, tagnam); in extractfeat_MatchPatternDescribe()
966 ajStrAppendS(strout, tagval); in extractfeat_MatchPatternDescribe()
H A Dbiosed.c155 ajStrAppendS(&str,tmp); in biosed_replace()
158 ajStrAppendS(&str,replace); in biosed_replace()
171 ajStrAppendS(&str,tmp); in biosed_replace()
174 ajStrAppendS(&str,replace); in biosed_replace()
H A Dmegamerger.c238 ajStrAppendS(&seqstr, tmp); in megamerger_Merge()
261 ajStrAppendS(&seqstr, tmp); in megamerger_Merge()
275 ajStrAppendS(&seqstr, tmp); in megamerger_Merge()
335 ajStrAppendS(&seqstr, tmp); in megamerger_Merge()
344 ajStrAppendS(&seqstr, tmp); in megamerger_Merge()
H A Dsplitsource.c166 ajStrAppendS(name_ptr, value); in splitsource_MakeSubSeqName()
169 ajStrAppendS(name_ptr, value); in splitsource_MakeSubSeqName()
172 ajStrAppendS(name_ptr, value); in splitsource_MakeSubSeqName()
230 ajStrAppendS(&desc, ajSeqGetDescS(seq)); in splitsource_ProcessChunk()
H A Ddescseq.c59 ajStrAppendS(&temp, name); in main()
67 ajStrAppendS(&temp, desc); in main()
H A Dnotab.c62 ajStrAppendS(&outline, tmpstr); in main()
72 ajStrAppendS(&outline, line); in main()
H A Dgetorf.c143 ajStrAppendS(&sseq, ajSeqGetSeqS(seq)); in main()
144 ajStrAppendS(&sseq, ajSeqGetSeqS(seq)); in main()
617 ajStrAppendS(&name, value); in getorf_WriteORF()
649 ajStrAppendS(&name, value); in getorf_WriteORF()
656 ajStrAppendS(&name, value); in getorf_WriteORF()
677 ajStrAppendS(&name, value); in getorf_WriteORF()
681 ajStrAppendS(&name, ajSeqGetDescS(seq)); in getorf_WriteORF()
H A Dextractseq.c81 ajStrAppendS(&name, value); in main()
84 ajStrAppendS(&name, value); in main()
H A Dorigsplitter.c146 ajStrAppendS(&name, value); in origsplitter_write()
149 ajStrAppendS(&name, value); in origsplitter_write()
H A Dmakeprotseq.c183 ajStrAppendS(&seq,seqchar[idx]); in makeprotseq_random_sequence()
263 ajStrAppendS(&ch,tok); in makeprotseq_parse_pepstats()
H A Dsplitter.c174 ajStrAppendS(name_ptr, value); in splitter_MakeSubSeqName()
177 ajStrAppendS(name_ptr, value); in splitter_MakeSubSeqName()
H A Dorigunion.c58 ajStrAppendS(&unistr, ajSeqGetSeqS(seq)); in main()
H A Daligncopy.c59 ajStrAppendS(&header, comment); in main()
H A Dtfm.c292 ajStrAppendS(path, program); in tfm_FindAppDoc()
349 ajStrAppendS(&newpath,path); in tfm_FixImages()
/dports/biology/emboss/EMBOSS-6.6.0/ajax/ensembl/
H A Denssequence.c786 ajStrAppendS(&tmpstr, chkstr); in ensSequenceadaptorFetchSeqregionSubStr()
834 ajStrAppendS(&tmpstr, chkstr); in ensSequenceadaptorFetchSeqregionSubStr()
1299 ajStrAppendS(Psequence, tmpstr); in ensSequenceadaptorFetchSliceSubStr()
1383 ajStrAppendS(Psequence, tmpstr); in ensSequenceadaptorFetchSliceSubStr()
1619 ajStrAppendS(Psequence, sequence1); in sequenceadaptorFetchCircularsliceSubStr()
1620 ajStrAppendS(Psequence, sequence2); in sequenceadaptorFetchCircularsliceSubStr()
1624 ajStrAppendS(Psequence, sequence2); in sequenceadaptorFetchCircularsliceSubStr()
1625 ajStrAppendS(Psequence, sequence1); in sequenceadaptorFetchCircularsliceSubStr()
1697 ajStrAppendS(Psequence, tmpstr); in sequenceadaptorFetchCircularsliceSubStr()
1781 ajStrAppendS(Psequence, tmpstr); in sequenceadaptorFetchCircularsliceSubStr()
H A Densdatabaseconnection.c1441 ajStrAppendS(Purl, dbc->Socketfile); in ensDatabaseconnectionFetchUrl()
1451 ajStrAppendS(Purl, dbc->Username); in ensDatabaseconnectionFetchUrl()
1456 ajStrAppendS(Purl, dbc->Password); in ensDatabaseconnectionFetchUrl()
1462 ajStrAppendS(Purl, dbc->Hostname); in ensDatabaseconnectionFetchUrl()
1467 ajStrAppendS(Purl, dbc->Hostport); in ensDatabaseconnectionFetchUrl()
1473 ajStrAppendS(Purl, dbc->Databasename); in ensDatabaseconnectionFetchUrl()
/dports/biology/emboss/EMBOSS-6.6.0/nucleus/
H A Dembgroup.c627 ajStrAppendS(&text, line); in grpParse()
696 ajStrAppendS(&ppnode->keywords, value); in grpParse()
874 ajStrAppendS(&text, line); in grpParseEmbassy()
1039 ajStrAppendS(&grpStr2, grpStr1); in grpParseValueRB()
1104 ajStrAppendS(keywords, keystr); in grpSplitList()
1233 ajStrAppendS(&head, sub[j]); in grpSubSplitList()
1251 ajStrAppendS(&revhead, sub[j]); in grpSubSplitList()
1267 ajStrAppendS(&tail, sub[j]); in grpSubSplitList()
1286 ajStrAppendS(&revtail, sub[j]); in grpSubSplitList()
2201 ajStrAppendS(&gname, keystr); in embGrpKeySearchProgs()

12345