| /dports/biology/emboss/EMBOSS-6.6.0/emboss/ |
| H A D | dbxobo.c | 415 ipos = ajStrFindAnyK(rest, ':'); in dbxobo_ParseObo()
427 ipos = ajStrFindAnyK(rest, ':'); in dbxobo_ParseObo()
473 ipos = ajStrFindAnyK(rest, ':'); in dbxobo_ParseObo()
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| H A D | dbxedam.c | 442 ipos = ajStrFindAnyK(rest, ':'); in dbxedam_ParseObo()
454 ipos = ajStrFindAnyK(rest, ':'); in dbxedam_ParseObo()
501 ipos = ajStrFindAnyK(rest, ':'); in dbxedam_ParseObo()
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| H A D | dbxtax.c | 511 pos = ajStrFindAnyK(tmpname, '<'); in dbxtax_ParseName()
522 pos = ajStrFindAnyK(tmpname, '('); in dbxtax_ParseName()
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| H A D | acdrelations.c | 585 pos = (ajuint) ajStrFindAnyK(line, ':'); in acdrelations_procacdfile1()
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| H A D | edamclean.c | 813 if(ajStrFindAnyK(line, '\"') != -1) in main()
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| /dports/biology/emboss/EMBOSS-6.6.0/ajax/core/ |
| H A D | ajobo.c | 540 colpos = 1 + ajStrFindAnyK(tag->Value, ':'); in ajOboGetParents()
549 colpos = 1 + ajStrFindAnyK(obo->Replaced, ':'); in ajOboGetParents()
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| H A D | ajftp.c | 331 ipos = (ajint) ajStrFindAnyK(pasvresponse, '('); in ftpSend()
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| H A D | ajfeat.c | 2470 ipos = ajStrFindAnyK(tagval, ':'); in ajFeattableGetXrefs()
2510 ipos = ajStrFindAnyK(tmpstr, ':'); in ajFeattableGetXrefs()
3320 ipos = ajStrFindAnyK(tagval, ':'); in ajFeatGetXrefs()
3355 ipos = ajStrFindAnyK(tmpstr, ':'); in ajFeatGetXrefs()
4569 ipos = ajStrFindAnyK(*Ptyptagstr, ';'); in featVocabReadTypes()
9393 i = ajStrFindAnyK(ret, ';'); in ajFeattypeGetExternal()
9757 ajStrAssignSubS(&tmpkey, tmpstr, 0, ajStrFindAnyK(tmpstr, ';')-1); in featTableTypeTestWild()
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| H A D | ajoboread.c | 3112 icolon = ajStrFindAnyK(id, ':'); in ajObodataParseObofile()
3593 ipos = ajStrFindAnyK(tmpname, '!'); in ajObodataParseObofile()
3622 ipos = ajStrFindAnyK(tmpname, '!'); in ajObodataParseObofile()
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| H A D | ajvarread.c | 2237 ipos = ajStrFindAnyK(str, '='); in varinFieldVcf()
2363 ipos = ajStrFindAnyK(str, '='); in varinFieldVcf3x()
2503 ipos = (ajuint) ajStrFindAnyK(str, '='); in varinSampleVcf()
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| H A D | ajrefseqread.c | 1689 dotpos = (ajint) ajStrFindAnyK(token, '.'); in refseqinReadEmblcon()
1690 colonpos = (ajint) ajStrFindAnyK(token, ':'); in refseqinReadEmblcon()
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| H A D | ajquery.c | 2503 else if(ajStrFindAnyK(qry->QryFields, ':') > 0) /* 1+ fields */ in ajQuerystrParseRead()
2544 i = ajStrFindAnyK(qrystr, ':'); in ajQuerystrParseRead()
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| H A D | ajseqread.c | 4643 (ajStrFindAnyK(seqReadLine, '>') != -1)) in seqReadNbrf()
9049 if(ajStrFindAnyK(seqReadLine, ';') != -1) in seqReadMega()
9062 if(ajStrFindAnyK(seqReadLine, ';') != -1) in seqReadMega()
9073 if(ajStrFindAnyK(seqReadLine, ';') != -1) in seqReadMega()
9108 if(ajStrFindAnyK(seqReadLine, ';') == -1) in seqReadMega()
9137 if(ajStrFindAnyK(seqReadLine, ';') == -1) in seqReadMega()
9307 if(ajStrFindAnyK(seqReadLine, ';') != -1) in seqReadMega()
13165 dotpos = (ajint) ajStrFindAnyK(token, '.'); in seqReadEmbl()
13166 colonpos = (ajint) ajStrFindAnyK(token, ':'); in seqReadEmbl()
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| H A D | ajstr.h | 587 ajlong ajStrFindAnyK(const AjPStr str, char chr);
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| H A D | ajfeatread.c | 3744 ipos = ajStrFindAnyK(opval, ','); /* multiple locations */ in featEmblProcess()
5804 ipos = ajStrFindAnyK(opval, ','); /* multiple locations */ in featRefseqpProcess()
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| H A D | ajstr.c | 11736 ajlong ajStrFindAnyK(const AjPStr str, char chr) in ajStrFindAnyK() function
16045 return (ajint) ajStrFindAnyK(thys, chr); in ajStrFindK()
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| H A D | ajfeatwrite.c | 5370 if(ajStrFindAnyK(*pval, '"') < 0) in featTagQuoteEmbl()
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| H A D | ajfile.c | 7739 if(ajStrFindAnyK(f,'.') >= 0) in ajFilelistAddDirectory()
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| H A D | ajseqwrite.c | 4855 if(ajStrFindAnyK(outseq->Name, '_') > 0) in seqWriteSwissnew()
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| /dports/biology/emboss/EMBOSS-6.6.0/ajax/ensembl/ |
| H A D | ensdatabaseentry.c | 5988 if (ajStrFindAnyK(dbname, '%') > 0) in ensDatabaseentryadaptorFetchAllbyName()
6162 if (ajStrFindAnyK(dbname, '%') > 0) in ensDatabaseentryadaptorFetchAllbyObject()
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| /dports/biology/emboss/EMBOSS-6.6.0/ajax/acd/ |
| H A D | ajacd.c | 5007 else if(ajStrFindAnyK(*pword, ':') > 0) in acdWordNextName()
21127 qpos = (ajint) ajStrFindAnyK(item->Expect, '?'); in acdHelpGalaxy()
21128 cpos = (ajint) ajStrFindAnyK(item->Expect, ':'); in acdHelpGalaxy()
21147 qpos = (ajint) ajStrFindAnyK(item->Expect, '?'); in acdHelpGalaxy()
21148 cpos = (ajint) ajStrFindAnyK(item->Expect, ':'); in acdHelpGalaxy()
24572 if (ajStrGetLen(attrstr[i]) && ajStrFindAnyK(attrstr[i], '$') < 0) in acdAttrTestValue()
24585 if (ajStrGetLen(defstr[i]) && ajStrFindAnyK(defstr[i], '$') < 0) in acdAttrTestValue()
33968 if(ajStrFindAnyK(typestr, '_') >= 0) in acdValidKnowntype()
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