/dports/biology/emboss/EMBOSS-6.6.0/ajax/core/ |
H A D | ajseqabi.c | 206 ajReadbinBinary(fp,1,l,(void*)ajStrGetuniquePtr(machine)); in ajSeqABIMachineName() 207 *(ajStrGetuniquePtr(machine)+l)='\0'; in ajSeqABIMachineName() 1029 ajReadbinBinary(fp,1,l,(void*)ajStrGetuniquePtr(sample)); in ajSeqABISampleName() 1030 *(ajStrGetuniquePtr(sample)+l)='\0'; in ajSeqABISampleName()
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H A D | ajtranslate.c | 586 cp = strchr(ajStrGetuniquePtr(text), '#'); in trnNoComment() 869 cq = ajStrGetuniquePtr(&transtr); in ajTrnSeqC() 924 cq = ajStrGetuniquePtr(&transtr); in ajTrnSeqInitC() 991 cq = ajStrGetuniquePtr(&transtr); in ajTrnSeqRevC() 1051 cq = ajStrGetuniquePtr(&transtr); in ajTrnSeqRevinitC()
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H A D | ajdan.c | 121 p = ajStrGetuniquePtr(&pair); in ajMeltInit() 140 p = ajStrGetuniquePtr(&line); in ajMeltInit()
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H A D | ajsys.c | 549 p = ajStrGetuniquePtr(&sysUserPath); in ajSysFileWhich() 684 p = ajSysFuncStrtokR(ajStrGetuniquePtr(&tmp),PATH_SEPARATOR,&save,&buf); in ajSysFileWhichEnv() 1491 return ajStrGetuniquePtr(&sysTokRets); in ajSysFuncStrtok() 1541 return ajStrGetuniquePtr(buf); in ajSysFuncStrtokR()
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H A D | ajseqtype.c | 1167 for(cp = ajStrGetuniquePtr(seq); strchr(seqCharGapTest, *cp); cp++) in seqGapSL() 1173 cp = ajStrGetuniquePtr(seq); in seqGapSL() 1182 cp = ajStrGetuniquePtr(seq); in seqGapSL()
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H A D | ajmess.c | 2023 buff = ajStrGetuniquePtr(pthis); in ajUserGet() 2075 buff = ajStrGetuniquePtr(pthis); in ajUserGet()
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H A D | ajfileio.c | 914 cp = ajStrGetuniquePtr(Pstr); in ajReadbinStr() 947 cp = ajStrGetuniquePtr(Pstr); in ajReadbinStrTrim()
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/dports/biology/emboss/EMBOSS-6.6.0/emboss/ |
H A D | showalign.c | 481 s = ajStrGetuniquePtr(&sstr); in showalign_MakeAll() 531 s = ajStrGetuniquePtr(&sstr); in showalign_MakeIdentity() 584 s = ajStrGetuniquePtr(&sstr); in showalign_MakeNonidentity() 653 s = ajStrGetuniquePtr(&sstr); in showalign_MakeSimilar() 716 s = ajStrGetuniquePtr(&sstr); in showalign_MakeDissimilar() 1176 cq = ajStrGetuniquePtr(&line); in showalign_OutputTicks()
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H A D | rebaseextract.c | 497 r = ajStrGetuniquePtr(&temp); in rebaseextract_process_pattern() 531 r = ajStrGetuniquePtr(&temp); in rebaseextract_process_pattern() 552 r = ajStrGetuniquePtr(&temp); in rebaseextract_process_pattern()
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H A D | prettyseq.c | 196 p = ajStrGetuniquePtr(s); in prettyseq_Translate() 212 q=ajStrGetuniquePtr(pro); in prettyseq_Translate()
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H A D | merger.c | 244 p = ajStrGetuniquePtr(&mm); in merger_Merge() 245 q = ajStrGetuniquePtr(&nn); in merger_Merge()
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H A D | pepcoil.c | 159 q = ajStrGetuniquePtr(&substr); in main() 494 p=ajStrGetuniquePtr(&line); in pepcoil_readcoildat()
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H A D | tfextract.c | 139 q = ajStrGetuniquePtr(&pattern); in main()
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H A D | transeq.c | 176 p = ajStrGetuniquePtr(&s); in transeq_Trim()
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H A D | antigenic.c | 149 q = p = ajStrGetuniquePtr(&substr); in main() 386 p = ajStrGetuniquePtr(&line); in antigenic_readAnti()
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H A D | biosed.c | 218 p = ajStrGetuniquePtr(&str); in biosed_delete()
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H A D | equicktandem.c | 116 sq = ajStrGetuniquePtr(&tseq); in main()
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H A D | emowse.c | 849 p = ajStrGetuniquePtr(&rev); in emowse_mreverse() 898 q = ajStrGetuniquePtr(&t); in emowse_seq_search() 899 s = ajStrGetuniquePtr(str); in emowse_seq_search()
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H A D | garnier.c | 403 ajStrGetuniquePtr(&substr),begin-1,Idc); in main() 408 ajStrGetuniquePtr(&substr),ajSeqGetNameC(seq),Idc); in main()
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H A D | cutgextract.c | 433 p = ajStrGetuniquePtr(&cutgextractOrg); in cutgextract_next()
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H A D | sigcleave.c | 142 q = ajStrGetuniquePtr(&substr); in main()
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H A D | printsextract.c | 201 p = ajStrGetuniquePtr(&tmpstr)+4; in printsextract_write_accession()
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/dports/biology/emboss/EMBOSS-6.6.0/ajax/ajaxdb/ |
H A D | ajseqdb.c | 2551 p = ajStrGetuniquePtr(&id); in seqEmbossGcgReadRef() 2695 p = ajStrGetuniquePtr(&id); in seqEmbossGcgReadSeq() 2757 ajStrGetuniquePtr(&seqin->Inseq))) in seqEmbossGcgReadSeq() 3857 p = ajStrGetuniquePtr(&id); in seqGcgReadRef() 4001 p = ajStrGetuniquePtr(&id); in seqGcgReadSeq() 4063 ajStrGetuniquePtr(&seqin->Inseq))) in seqGcgReadSeq() 4185 start = ajStrGetuniquePtr(pthis); in seqGcgBinDecode() 4544 ajStrGetuniquePtr(&Title))) in seqBlastOpen() 6666 seq = ajStrGetuniquePtr(sline); in seqBlastReadTable() 6692 seq = ajStrGetuniquePtr(sline); in seqBlastReadTable() [all …]
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H A D | ajfeatdb.c | 1547 p = ajStrGetuniquePtr(&id); in featGcgReadRef() 1689 p = ajStrGetuniquePtr(&id); in featGcgReadSeq() 1751 ajStrGetuniquePtr(&contseq))) in featGcgReadSeq() 1801 ajStrGetuniquePtr(&contseq))) in featGcgReadSeq() 1874 start = ajStrGetuniquePtr(pthis); in featGcgBinDecode() 2769 p = ajStrGetuniquePtr(&id); in featEmbossGcgReadRef() 2912 p = ajStrGetuniquePtr(&id); in featEmbossGcgReadSeq() 2974 ajStrGetuniquePtr(&contseq))) in featEmbossGcgReadSeq() 3023 ajStrGetuniquePtr(&contseq))) in featEmbossGcgReadSeq()
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/dports/biology/emboss/EMBOSS-6.6.0/nucleus/ |
H A D | embmat.c | 336 p = q = ajStrGetuniquePtr(&t); in embMatProtScanInt()
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