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/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/readthreading/
H A DJunctionTreeLinkedDeBruijnGraphUnitTest.java298 String altTRead1 = "GGAAATGTC"; // Replaces a T with a G in testSimpleJunctionTreeIncludeRefInJunctionTreeNoStopEnd() local
302 assembler.addSequence("anonymous", getBytes(altTRead1), false); in testSimpleJunctionTreeIncludeRefInJunctionTreeNoStopEnd()
334 String altTRead1 = "GGAAATGTC"; // Replaces a T with a G in testSimpleJunctionTreeIncludeRefInJunctionTreeNoWithStartEndChanges() local
338 assembler.addSequence("anonymous", getBytes(altTRead1), false); in testSimpleJunctionTreeIncludeRefInJunctionTreeNoWithStartEndChanges()