| /dports/cad/yosys/yosys-yosys-0.12/passes/cmds/ |
| H A D | qwp.cc | 68 double pos, alt_pos; member
75 alt_pos = xorshift32(); in Node()
85 alt_pos = v; in alt_tie()
90 std::swap(pos, alt_pos); in swap_alt()
257 double rhs = (alt_mode ? node.alt_pos : node.pos); in solve()
376 nodes[i].alt_pos = v; in solve()
395 log("X=%.2f, Y=%.2f", node.pos, node.alt_pos); in log_cell_coordinates()
397 log("X=%.2f, Y=%.2f", node.alt_pos, node.pos); in log_cell_coordinates()
753 double distance = sqrt(pow(node1.pos - node2.pos, 2) + pow(node1.alt_pos - node2.alt_pos, 2)); in run()
858 worker.nodes[edge.first.first].alt_pos, in execute()
[all …]
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| /dports/www/tikiwiki/tiki-21.2/lib/smarty_tiki/ |
| H A D | function.icon.php | 188 $alt_pos = ( ($alt_pos = strrpos($params['_id'], '_')) === false ) ? 0 : $alt_pos + 1;
189 $params['alt'] = tra(ucfirst(substr($params['_id'], $alt_pos)));
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| /dports/biology/py-pysam/pysam-0.18.0/samtools/ |
| H A D | bam2bcf.c | 59 bca->alt_pos = malloc(bca->npos*sizeof(int)); in bcf_call_init()
74 if (bca->npos) { free(bca->ref_pos); free(bca->alt_pos); bca->npos = 0; } in bcf_call_destroy()
121 memset(bca->alt_pos,0,sizeof(int)*bca->npos); in bcf_callaux_clean()
235 bca->alt_pos[epos]++; in bcf_call_glfgen()
660 call->mwu_pos = calc_mwu_bias(bca->ref_pos, bca->alt_pos, bca->npos); in bcf_call_combine()
666 call->mwu_pos_cdf = calc_mwu_bias_cdf(bca->ref_pos, bca->alt_pos, bca->npos); in bcf_call_combine()
672 call->vdb = calc_vdb(bca->alt_pos, bca->npos); in bcf_call_combine()
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| H A D | bam2bcf.c.pysam.c | 61 bca->alt_pos = malloc(bca->npos*sizeof(int)); in bcf_call_init()
76 if (bca->npos) { free(bca->ref_pos); free(bca->alt_pos); bca->npos = 0; } in bcf_call_destroy()
123 memset(bca->alt_pos,0,sizeof(int)*bca->npos); in bcf_callaux_clean()
237 bca->alt_pos[epos]++; in bcf_call_glfgen()
662 call->mwu_pos = calc_mwu_bias(bca->ref_pos, bca->alt_pos, bca->npos); in bcf_call_combine()
668 call->mwu_pos_cdf = calc_mwu_bias_cdf(bca->ref_pos, bca->alt_pos, bca->npos); in bcf_call_combine()
674 call->vdb = calc_vdb(bca->alt_pos, bca->npos); in bcf_call_combine()
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| H A D | bam2bcf.h | 68 …int *ref_pos, *alt_pos, npos, *ref_mq, *alt_mq, *ref_bq, *alt_bq, *fwd_mqs, *rev_mqs, nqual; // fo… member
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| /dports/biology/samtools/samtools-1.14/ |
| H A D | bam2bcf.c | 59 bca->alt_pos = malloc(bca->npos*sizeof(int)); in bcf_call_init()
74 if (bca->npos) { free(bca->ref_pos); free(bca->alt_pos); bca->npos = 0; } in bcf_call_destroy()
121 memset(bca->alt_pos,0,sizeof(int)*bca->npos); in bcf_callaux_clean()
235 bca->alt_pos[epos]++; in bcf_call_glfgen()
660 call->mwu_pos = calc_mwu_bias(bca->ref_pos, bca->alt_pos, bca->npos); in bcf_call_combine()
666 call->mwu_pos_cdf = calc_mwu_bias_cdf(bca->ref_pos, bca->alt_pos, bca->npos); in bcf_call_combine()
672 call->vdb = calc_vdb(bca->alt_pos, bca->npos); in bcf_call_combine()
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| H A D | bam2bcf.h | 68 …int *ref_pos, *alt_pos, npos, *ref_mq, *alt_mq, *ref_bq, *alt_bq, *fwd_mqs, *rev_mqs, nqual; // fo… member
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| /dports/biology/bcftools/bcftools-1.14/ |
| H A D | bam2bcf.c | 60 bca->alt_pos = (int*) malloc(bca->npos*sizeof(int)); in bcf_call_init()
80 free(bca->ref_pos); free(bca->alt_pos); in bcf_call_destroy()
147 memset(bca->alt_pos,0,sizeof(int)*bca->npos); in bcf_callaux_clean()
330 bca->alt_pos[epos]++; in bcf_call_glfgen()
936 call->mwu_pos = calc_mwu_biasZ(bca->ref_pos, bca->alt_pos, in bcf_call_combine()
951 call->mwu_pos = calc_mwu_biasZ(bca->ref_pos, bca->alt_pos, in bcf_call_combine()
964 call->mwu_pos_cdf = calc_mwu_bias_cdf(bca->ref_pos, bca->alt_pos, bca->npos); in bcf_call_combine()
971 call->vdb = calc_vdb(bca->alt_pos, bca->npos); in bcf_call_combine()
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| H A D | bam2bcf.h | 88 …int *ref_pos, *alt_pos, npos, *ref_mq, *alt_mq, *ref_bq, *alt_bq, *fwd_mqs, *rev_mqs, nqual; // fo… member
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| /dports/biology/bio-mocha/bcftools-1.14/ |
| H A D | bam2bcf.c | 60 bca->alt_pos = (int*) malloc(bca->npos*sizeof(int)); in bcf_call_init()
80 free(bca->ref_pos); free(bca->alt_pos); in bcf_call_destroy()
147 memset(bca->alt_pos,0,sizeof(int)*bca->npos); in bcf_callaux_clean()
330 bca->alt_pos[epos]++; in bcf_call_glfgen()
936 call->mwu_pos = calc_mwu_biasZ(bca->ref_pos, bca->alt_pos, in bcf_call_combine()
951 call->mwu_pos = calc_mwu_biasZ(bca->ref_pos, bca->alt_pos, in bcf_call_combine()
964 call->mwu_pos_cdf = calc_mwu_bias_cdf(bca->ref_pos, bca->alt_pos, bca->npos); in bcf_call_combine()
971 call->vdb = calc_vdb(bca->alt_pos, bca->npos); in bcf_call_combine()
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| H A D | bam2bcf.h | 88 …int *ref_pos, *alt_pos, npos, *ref_mq, *alt_mq, *ref_bq, *alt_bq, *fwd_mqs, *rev_mqs, nqual; // fo… member
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| /dports/biology/py-pysam/pysam-0.18.0/bcftools/ |
| H A D | bam2bcf.c | 60 bca->alt_pos = (int*) malloc(bca->npos*sizeof(int)); in bcf_call_init()
80 free(bca->ref_pos); free(bca->alt_pos); in bcf_call_destroy()
147 memset(bca->alt_pos,0,sizeof(int)*bca->npos); in bcf_callaux_clean()
330 bca->alt_pos[epos]++; in bcf_call_glfgen()
936 call->mwu_pos = calc_mwu_biasZ(bca->ref_pos, bca->alt_pos, in bcf_call_combine()
951 call->mwu_pos = calc_mwu_biasZ(bca->ref_pos, bca->alt_pos, in bcf_call_combine()
964 call->mwu_pos_cdf = calc_mwu_bias_cdf(bca->ref_pos, bca->alt_pos, bca->npos); in bcf_call_combine()
971 call->vdb = calc_vdb(bca->alt_pos, bca->npos); in bcf_call_combine()
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| H A D | bam2bcf.c.pysam.c | 62 bca->alt_pos = (int*) malloc(bca->npos*sizeof(int)); in bcf_call_init()
82 free(bca->ref_pos); free(bca->alt_pos); in bcf_call_destroy()
149 memset(bca->alt_pos,0,sizeof(int)*bca->npos); in bcf_callaux_clean()
332 bca->alt_pos[epos]++; in bcf_call_glfgen()
938 call->mwu_pos = calc_mwu_biasZ(bca->ref_pos, bca->alt_pos, in bcf_call_combine()
953 call->mwu_pos = calc_mwu_biasZ(bca->ref_pos, bca->alt_pos, in bcf_call_combine()
966 call->mwu_pos_cdf = calc_mwu_bias_cdf(bca->ref_pos, bca->alt_pos, bca->npos); in bcf_call_combine()
973 call->vdb = calc_vdb(bca->alt_pos, bca->npos); in bcf_call_combine()
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| H A D | bam2bcf.h | 88 …int *ref_pos, *alt_pos, npos, *ref_mq, *alt_mq, *ref_bq, *alt_bq, *fwd_mqs, *rev_mqs, nqual; // fo… member
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| /dports/comms/rtl-433/rtl_433-21.12/src/devices/ |
| H A D | oregon_scientific.c | 609 int alt_pos = bitbuffer_search(bitbuffer, 0, 0, alt_pattern, 16) + 16; in oregon_scientific_v3_decode() local
628 else if (bitbuffer->bits_per_row[0] - alt_pos >= 7 * 8) { in oregon_scientific_v3_decode()
629 msg_pos = alt_pos; in oregon_scientific_v3_decode()
630 msg_len = bitbuffer->bits_per_row[0] - alt_pos; in oregon_scientific_v3_decode()
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| /dports/lang/racket/racket-8.3/src/rktio/ |
| H A D | rktio_process.c | 1173 int alt_pos = (pos ? 0 : 1); in CopyFileHandleForSubprocess() local
1183 hs[alt_pos] = 1; in CopyFileHandleForSubprocess()
1185 hs[alt_pos] = 0; in CopyFileHandleForSubprocess()
1191 int alt_pos = (pos ? 0 : 1); in CloseFileHandleForSubprocess() local
1192 if (hs[alt_pos]) { in CloseFileHandleForSubprocess()
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| /dports/lang/racket-minimal/racket-8.3/src/rktio/ |
| H A D | rktio_process.c | 1173 int alt_pos = (pos ? 0 : 1); in CopyFileHandleForSubprocess() local
1183 hs[alt_pos] = 1; in CopyFileHandleForSubprocess()
1185 hs[alt_pos] = 0; in CopyFileHandleForSubprocess()
1191 int alt_pos = (pos ? 0 : 1); in CloseFileHandleForSubprocess() local
1192 if (hs[alt_pos]) { in CloseFileHandleForSubprocess()
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| /dports/games/tads/tads-3.0.8/tads3/ |
| H A D | vmgram.cpp | 337 int tok_pos, int alt_pos, in alloc()
355 state->init(tok_pos, alt_pos, enclosing, altp, prod_obj, in alloc()
363 void init(int tok_pos, int alt_pos, CVmGramProdState *enclosing, in init()
369 alt_pos_ = alt_pos; in init()
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| /dports/biology/hisat2/hisat2-2.2.1/evaluation/simulation/ |
| H A D | calculate_read_cost.py | 856 alt_chr, alt_pos, alt_cigar_str, alt_NM = alignment.split(',')
857 alt_pos, alt_NM = abs(int(alt_pos)), int(alt_NM)
860 alignments.append([alt_chr, alt_pos, alt_cigar_str])
1077 alt_chr, alt_pos, alt_cigar_str, alt_NM = alignment.split(',')
1078 alt_pos, alt_NM = abs(int(alt_pos)), int(alt_NM)
1081 alignments.append([alt_chr, alt_pos, alt_cigar_str])
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| /dports/math/fricas/fricas-1.3.7/src/etc/ |
| H A D | asq.c | 724 item_list * ct, int alt_pos) in scan_file() argument
756 } else if (alt_pos && !strcmp(key, in scan_file()
757 string_val(decode(iml->buff[alt_pos], ct)))) { in scan_file()
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| /dports/biology/hisat2/hisat2-2.2.1/evaluation/tests/HLA_novel/ |
| H A D | hisatgenotype_locus_prev.py | 767 alt_type, alt_pos, alt_data = Vars[alt]
768 alt_left_pos = alt_pos - 1
788 alt_type, alt_pos, alt_data = Vars[alt]
789 alt_left_pos = alt_pos - 1
841 alt_type, alt_pos, alt_data = Vars[alt]
842 alt_right_pos = alt_pos
867 alt_type, alt_pos, alt_data = Vars[alt]
868 alt_right_pos = alt_pos
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| /dports/biology/ncbi-toolkit/ncbi/api/ |
| H A D | alignmgr2.c | 328 Int4 alt_pos; member
2711 s->alt_pos = -1; in AlnMgr2CreateSeqPieceSet()
2756 s->alt_pos = -1; in AlnMgr2GetNextSeqPiece()
2829 s->alt_pos = -1; in AlnMgr2GetNextLimitedSeqPiece()
2855 s->alt_pos = -1; in AlnMgr2AddSeqPiece()
2861 s->alt_pos = what->pos; in AlnMgr2AddSeqPiece()
2897 s->alt_pos = -1; in AlnMgr2InsertSeqPiece()
2901 s->alt_pos = what->pos; in AlnMgr2InsertSeqPiece()
2909 s->alt_pos = -1; in AlnMgr2InsertSeqPiece()
3272 A->alt_pos = a->pos; in AlnMgr2AddInNewPairwiseSA()
[all …]
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| /dports/math/stanmath/math-4.2.0/lib/boost_1.75.0/tools/quickbook/src/ |
| H A D | actions.cpp | 955 attribute_map::iterator alt_pos = attributes.find("alt"); in image_action() local
956 quickbook::value alt_text = alt_pos != attributes.end() in image_action()
957 ? alt_pos->second in image_action()
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| /dports/devel/boost-docs/boost_1_72_0/tools/quickbook/src/ |
| H A D | actions.cpp | 955 attribute_map::iterator alt_pos = attributes.find("alt"); in image_action() local
956 quickbook::value alt_text = alt_pos != attributes.end() in image_action()
957 ? alt_pos->second in image_action()
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| /dports/devel/boost-libs/boost_1_72_0/tools/quickbook/src/ |
| H A D | actions.cpp | 955 attribute_map::iterator alt_pos = attributes.find("alt"); in image_action() local
956 quickbook::value alt_text = alt_pos != attributes.end() in image_action()
957 ? alt_pos->second in image_action()
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