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Searched refs:amino_dynamicmtx (Results 1 – 3 of 3) sorted by relevance

/dports/biology/mafft/mafft-7.267-without-extensions/core/
H A DLalign11.c238 static TLS double **amino_dynamicmtx = NULL; // ?? in L__align11() local
285 if( amino_dynamicmtx ) FreeDoubleMtx( amino_dynamicmtx ); amino_dynamicmtx = NULL; in L__align11()
340 if( amino_dynamicmtx ) FreeDoubleMtx( amino_dynamicmtx ); amino_dynamicmtx = NULL; in L__align11()
373 amino_dynamicmtx = AllocateDoubleMtx( 0x80, 0x80 ); in L__align11()
424 match_calc_mtx( amino_dynamicmtx, currentw, seq1, seq2, 0, lgth2 ); in L__align11()
481 match_calc_mtx( amino_dynamicmtx, currentw, seq1, seq2, i, lgth2 ); in L__align11()
778 static TLS double **amino_dynamicmtx = NULL; // ?? in L__align11_noalign() local
807 if( amino_dynamicmtx ) FreeDoubleMtx( amino_dynamicmtx ); amino_dynamicmtx = NULL; in L__align11_noalign()
845 if( amino_dynamicmtx ) FreeDoubleMtx( amino_dynamicmtx ); amino_dynamicmtx = NULL; in L__align11_noalign()
874 amino_dynamicmtx = AllocateDoubleMtx( 0x80, 0x80 ); in L__align11_noalign()
[all …]
H A DGalign11.c204 static TLS double **amino_dynamicmtx = NULL; // ?? in G__align11() local
245 if( amino_dynamicmtx ) FreeDoubleMtx( amino_dynamicmtx ); amino_dynamicmtx = NULL; in G__align11()
344 FreeDoubleMtx( amino_dynamicmtx ); in G__align11()
369 amino_dynamicmtx = AllocateDoubleMtx( 0x80, 0x80 ); in G__align11()
424 match_calc_mtx( amino_dynamicmtx, currentw, seq1, seq2, 0, lgth2 ); in G__align11()
474 match_calc_mtx( amino_dynamicmtx, currentw, seq1, seq2, i, lgth2 ); in G__align11()
715 static TLS double **amino_dynamicmtx; in G__align11_noalign() local
733 FreeDoubleMtx( amino_dynamicmtx ); in G__align11_noalign()
775 FreeDoubleMtx( amino_dynamicmtx ); in G__align11_noalign()
800 amino_dynamicmtx = AllocateDoubleMtx( 0x80, 0x80 ); in G__align11_noalign()
[all …]
H A Dgenalign11.c149 static TLS double **amino_dynamicmtx = NULL; // ?? in genL__align11() local
190 if( amino_dynamicmtx ) FreeDoubleMtx( amino_dynamicmtx ); amino_dynamicmtx = NULL; in genL__align11()
234 if( amino_dynamicmtx ) FreeDoubleMtx( amino_dynamicmtx ); amino_dynamicmtx = NULL; in genL__align11()
264 amino_dynamicmtx = AllocateDoubleMtx( 0x80, 0x80 ); in genL__align11()
275 amino_dynamicmtx[(int)amino[i]][(int)amino[j]] = (double)n_dynamicmtx[i][j]; in genL__align11()
320 match_calc_mtx( amino_dynamicmtx, initverticalw, seq2, seq1, 0, lgth1 ); in genL__align11()
322 match_calc_mtx( amino_dynamicmtx, currentw, seq1, seq2, 0, lgth2 ); in genL__align11()
378 match_calc_mtx( amino_dynamicmtx, currentw, seq1, seq2, i, lgth2 ); in genL__align11()