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/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/funcotator/simpletsvoutput/
H A DSimpleTsvOutputRendererUnitTest.java76 Arrays.asList( in createDummySegmentFuncotationMetadata()
298 …inkedHashMapFromLists(Arrays.asList("foo", "bar"), Arrays.asList(Arrays.asList("DUMMY1", "DUMMY2",… in provideForAliasing()
307 …inkedHashMapFromLists(Arrays.asList("foo", "bar"), Arrays.asList(Arrays.asList("DUMMY1", "DUMMY2",… in provideForAliasing()
316 …inkedHashMapFromLists(Arrays.asList("foo", "bar"), Arrays.asList(Arrays.asList("DUMMY1", "DUMMY2",… in provideForAliasing()
325 …inkedHashMapFromLists(Arrays.asList("foo", "bar"), Arrays.asList(Arrays.asList("DUMMY1", "DUMMY2",… in provideForAliasing()
334 …inkedHashMapFromLists(Arrays.asList("foo", "bar"), Arrays.asList(Arrays.asList("DUMMY1", "DUMMY2",… in provideForAliasing()
344 …inkedHashMapFromLists(Arrays.asList("foo", "bar"), Arrays.asList(Arrays.asList("DUMMY1", "DUMMY2",… in provideForAliasing()
354 …inkedHashMapFromLists(Arrays.asList("foo", "bar"), Arrays.asList(Arrays.asList("DUMMY1", "DUMMY2",… in provideForAliasing()
363 …rUtils.createLinkedHashMapFromLists(Arrays.asList("foo3"), Arrays.asList("val3")), new HashSet<>(A… in provideForAliasing()
364 …inkedHashMapFromLists(Arrays.asList("foo", "bar"), Arrays.asList(Arrays.asList("DUMMY1", "DUMMY2",… in provideForAliasing()
[all …]
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/utils/
H A DSequenceDictionaryUtilsUnitTest.java82 …{ Arrays.asList(CHR1_HG19), Arrays.asList(CHR1_HG19), … in generateSequenceDictionaryTestData()
83 …{ Arrays.asList(CHR1_HG19), Arrays.asList(CHR1_HG19), … in generateSequenceDictionaryTestData()
269 { Arrays.asList(CHR1_HG19, CHR2_HG19), Arrays.asList(CHR2_HG19, CHR1_HG19) }, in getStandardValidationIgnoresContigOrderData()
270 … { Arrays.asList(CHR1_HG19, CHR2_HG19), Arrays.asList(CHR2_HG19, CHR1_HG19, CHR10_HG19) }, in getStandardValidationIgnoresContigOrderData()
271 … { Arrays.asList(CHR1_HG19, CHR2_HG19), Arrays.asList(CHR10_HG19, CHR2_HG19, CHR1_HG19) }, in getStandardValidationIgnoresContigOrderData()
272 … { Arrays.asList(CHR1_HG19, CHR2_HG19), Arrays.asList(CHR2_HG19, CHR10_HG19, CHR1_HG19) }, in getStandardValidationIgnoresContigOrderData()
290 … { Arrays.asList(CHR1_HG19, CHR2_HG19), Arrays.asList(CHR2_HG19, CHR1_HG19, CHR10_HG19) }, in getNonSupersetData()
291 … { Arrays.asList(CHR1_HG19), Arrays.asList(CHR10_HG19, CHR2_HG19, CHR1_HG19) } in getNonSupersetData()
318 …{ Arrays.asList(CHR2_HG19, CHR1_HG19, CHR10_HG19), Arrays.asList(CHR2_HG19, CHR1_HG19, CHR10_HG19)… in getSupersetData()
319 … { Arrays.asList(CHR2_HG19, CHR1_HG19, CHR10_HG19), Arrays.asList(CHR1_HG19, CHR2_HG19) }, in getSupersetData()
[all …]
/dports/java/openjdk8/jdk8u-jdk8u312-b07.1/jdk/src/share/classes/sun/net/
H A DRegisteredDomain.java116 private static Set<String> usStateSet = new HashSet<String>(Arrays.asList("ak",
152 topMap.put( "an", new HashSet<String>(Arrays.asList("com")));
176 topMap.put( "bw", new HashSet<String>(Arrays.asList("co", "gov", "org")));
206 topMap.put( "eu", new HashSet<String>(Arrays.asList("europa")));
223 topMap.put( /* hk */ "xn--j6w193g", new HashSet<String>(Arrays.asList(
415 topMap.put( "nc", new HashSet<String>(Arrays.asList("asso", "nom")));
573 topMap.put( "pf", new HashSet<String>(Arrays.asList( "com")));
644 topMap.put( "sk", new HashSet<String>(Arrays.asList("gov", "edu")));
658 topMap.put( "to", new HashSet<String>(Arrays.asList("gov")));
680 topMap.put("org", new HashSet<String>(Arrays.asList("ae", "za")));
[all …]
/dports/java/openjdk8-jre/jdk8u-jdk8u312-b07.1/jdk/src/share/classes/sun/net/
H A DRegisteredDomain.java116 private static Set<String> usStateSet = new HashSet<String>(Arrays.asList("ak",
152 topMap.put( "an", new HashSet<String>(Arrays.asList("com")));
176 topMap.put( "bw", new HashSet<String>(Arrays.asList("co", "gov", "org")));
206 topMap.put( "eu", new HashSet<String>(Arrays.asList("europa")));
223 topMap.put( /* hk */ "xn--j6w193g", new HashSet<String>(Arrays.asList(
415 topMap.put( "nc", new HashSet<String>(Arrays.asList("asso", "nom")));
573 topMap.put( "pf", new HashSet<String>(Arrays.asList( "com")));
644 topMap.put( "sk", new HashSet<String>(Arrays.asList("gov", "edu")));
658 topMap.put( "to", new HashSet<String>(Arrays.asList("gov")));
680 topMap.put("org", new HashSet<String>(Arrays.asList("ae", "za")));
[all …]
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/utils/read/
H A DCigarBuilderUnitTest.java18 Arrays.asList("10H","10S") in cigarAlgebra()
23 Arrays.asList("10M","10I", "10M"), in cigarAlgebra()
24 Arrays.asList("10M","10D", "10M") in cigarAlgebra()
31 Arrays.asList("10S","10H") in cigarAlgebra()
185 {Arrays.asList("10S")}, in invalid()
251 {Arrays.asList("10M"), Arrays.asList("10M"), 0, 0}, in removedDeletionsTwoMakes()
252 {Arrays.asList("10M", "10I"), Arrays.asList("10D", "10M"), 0, 0}, in removedDeletionsTwoMakes()
253 {Arrays.asList("10M", "10D"), Arrays.asList("10I", "10M"), 0, 0}, in removedDeletionsTwoMakes()
255 {Arrays.asList("10D", "10I"), Arrays.asList("10M"), 10, 0}, in removedDeletionsTwoMakes()
256 {Arrays.asList("10D", "10D", "10I"), Arrays.asList("10D", "10M"), 30, 0}, in removedDeletionsTwoMakes()
[all …]
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/engine/
H A DMultiIntervalLocalReadShardUnitTest.java24 …adShard(Arrays.asList(new SimpleInterval("1", 200, 250)), 0, readsSource), Arrays.asList(new Simpl… in shardBoundsTestData()
25 …dShard(Arrays.asList(new SimpleInterval("1", 200, 250)), 25, readsSource), Arrays.asList(new Simpl… in shardBoundsTestData()
26 …dShard(Arrays.asList(new SimpleInterval("1", 200, 250)), 50, readsSource), Arrays.asList(new Simpl… in shardBoundsTestData()
27 …dShard(Arrays.asList(new SimpleInterval("1", 200, 250)), 500, readsSource), Arrays.asList(new Simp… in shardBoundsTestData()
31 …asList(new SimpleInterval("1", 100, 200), new SimpleInterval("1", 250, 350)), 50, readsSource), Ar… in shardBoundsTestData()
159 …{new MultiIntervalLocalReadShard(Arrays.asList(new SimpleInterval("1", 200, 210)), 0, readsSource)… in shardIterationTestData()
160 …{new MultiIntervalLocalReadShard(Arrays.asList(new SimpleInterval("1", 200, 209)), 0, readsSource)… in shardIterationTestData()
161 …{new MultiIntervalLocalReadShard(Arrays.asList(new SimpleInterval("1", 200, 204)), 0, readsSource)… in shardIterationTestData()
168 {filteredShard, Arrays.asList("b") }, in shardIterationTestData()
169 {downsampledShard, Arrays.asList("b", "c")}, in shardIterationTestData()
[all …]
H A DFeatureDataSourceUnitTest.java88 { UNINDEXED_VCF, Arrays.asList("a", "b", "c") } in getCompleteIterationTestData()
106 { Arrays.asList(new SimpleInterval("1", 100, 200)), Arrays.asList("a", "b", "c") }, in getTraversalByIntervalsTestData()
109 …{ Arrays.asList(new SimpleInterval("1", 100, 200), new SimpleInterval("1", 1000, 2000)), Arrays.as… in getTraversalByIntervalsTestData()
118 …{ Arrays.asList(new SimpleInterval("1", 200, 300), new SimpleInterval("2", 500, 600)), Arrays.asLi… in getTraversalByIntervalsTestData()
179 { new SimpleInterval("1", 100, 100), Arrays.asList("a") },
183 { new SimpleInterval("1", 201, 203), Arrays.asList("d") },
184 { new SimpleInterval("1", 204, 204), Arrays.asList("d") },
539 List<ArtificialTestFeature> feats = Arrays.asList( in getFeatureCacheTrimmingData()
603 List<ArtificialTestFeature> feats = Arrays.asList( in getFeatureCacheRetrievalData()
635 Pair.of(4, Arrays.asList(feats.get(0), feats.get(1))), in getFeatureCacheRetrievalData()
[all …]
H A DReadsPathDataSourceUnitTest.java169 Arrays.<String>asList("d", "e") in getSingleFileTraversalWithIntervalsData()
173 Arrays.<String>asList("d") in getSingleFileTraversalWithIntervalsData()
177 Arrays.<String>asList() in getSingleFileTraversalWithIntervalsData()
222 Arrays.<String>asList("j") in getSingleFileQueryByIntervalData()
226 Arrays.<String>asList() in getSingleFileQueryByIntervalData()
230 Arrays.<String>asList() in getSingleFileQueryByIntervalData()
323 Arrays.<String>asList() in getMultipleFilesTraversalWithIntervalsData()
368 Arrays.<String>asList("o") in getMultipleFilesQueryByIntervalData()
376 Arrays.<String>asList() in getMultipleFilesQueryByIntervalData()
417 …{ unmappedBam, Arrays.asList(new SimpleInterval("1", 200, 1000)), false, Arrays.asList("a", "b", "… in traversalWithUnmappedReadsTestData()
[all …]
/dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/funcotator/mafOutput/
H A DMafOutputRendererConstants.java183 …ring> OutputFieldNameMap_Center = Arrays.asList(FieldName_Center, …
194 …ring> OutputFieldNameMap_dbSNP_RS = Arrays.asList(FieldName_dbSNP_RS…
205 …ring> OutputFieldNameMap_Validation_Status = Arrays.asList(FieldName_Validati…
206 …ring> OutputFieldNameMap_Mutation_Status = Arrays.asList(FieldName_Mutation…
207 …ring> OutputFieldNameMap_Sequencing_Phase = Arrays.asList(FieldName_Sequenci…
208 …ring> OutputFieldNameMap_Sequence_Source = Arrays.asList(FieldName_Sequence…
210 …ring> OutputFieldNameMap_Score = Arrays.asList(FieldName_Score, "…
212 …ring> OutputFieldNameMap_Sequencer = Arrays.asList(FieldName_Sequence…
230 …ring> OutputFieldNameMap_UniProt_Region = Arrays.asList(FieldName_UniProt_…
231 …ring> OutputFieldNameMap_UniProt_Site = Arrays.asList(FieldName_UniProt_…
[all …]
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/utils/haplotype/
H A DEventMapUnitTest.java31 Arrays.asList(Arrays.asList("GGG", "CCC"))}); in makeMNPTest()
33 … Arrays.asList(Arrays.asList("G", "C"), Arrays.asList("G", "C"), Arrays.asList("G", "C"))}); in makeMNPTest()
35 Arrays.asList(Arrays.asList("GGG", "CCC"))}); in makeMNPTest()
37 … Arrays.asList(Arrays.asList("G", "C"), Arrays.asList("G", "C"), Arrays.asList("G", "C"))}); in makeMNPTest()
41 Arrays.asList(Arrays.asList("ACGT", "CGTA"))}); in makeMNPTest()
43 …Arrays.asList(Arrays.asList("A", "C"), Arrays.asList("C", "G"), Arrays.asList("G", "T"), Arrays.as… in makeMNPTest()
45 Arrays.asList(Arrays.asList("AC", "CA"), Arrays.asList("GC", "CG"))}); in makeMNPTest()
47 Arrays.asList(Arrays.asList("ACTTGC", "CATTCG"))}); in makeMNPTest()
49 …Arrays.asList(Arrays.asList("A", "C"), Arrays.asList("C", "A"), Arrays.asList("G", "C"), Arrays.as… in makeMNPTest()
142 …tests.add(new Object[]{Arrays.asList("A", "G"), Arrays.asList("AGT", "A"), Arrays.asList("AGT", "G… in makeMakeBlockData()
[all …]
/dports/science/opsin/dan2097-opsin-9b25f7546b67/opsin-core/src/test/java/uk/ac/cam/ch/wwmm/opsin/
H A DWordToolsTest.java14 …ParseTokens pTokens = new ParseTokens(Arrays.asList("fooane",""), Arrays.asList('a', OpsinTools.EN… in testNormalCase()
34 …ParseTokens pTokens = new ParseTokens(Arrays.asList("functionalfoo",""), Arrays.asList('a', OpsinT… in testNormalCase3()
44 …ParseTokens pTokens1 = new ParseTokens(Arrays.asList("fooane",""), Arrays.asList('a', OpsinTools.E… in testNormalCase4()
45 …ParseTokens pTokens2 = new ParseTokens(Arrays.asList("fooane",""), Arrays.asList('b', OpsinTools.E… in testNormalCase4()
61 …ParseTokens pTokensFunc = new ParseTokens(Arrays.asList("poly",""), Arrays.asList('a', OpsinTools.… in testStartingFunctionalTerm1()
65 …ParseTokens pTokensGroup = new ParseTokens(Arrays.asList("foo",""), Arrays.asList('a', OpsinTools.… in testStartingFunctionalTerm1()
76 …ParseTokens pTokensFunc = new ParseTokens(Arrays.asList("poly",""), Arrays.asList('a', OpsinTools.… in testStartingFunctionalTerm2()
80 …ParseTokens pTokensGroup = new ParseTokens(Arrays.asList("foo",""), Arrays.asList('a', OpsinTools.… in testStartingFunctionalTerm2()
91 …ParseTokens pTokensSub = new ParseTokens(Arrays.asList("fooyl",""), Arrays.asList('a', OpsinTools.… in testTerminalFunctionalTerm()
107 …ParseTokens pTokensSub1 = new ParseTokens(Arrays.asList("fooyl",""), Arrays.asList('a', OpsinTools… in testMultipleParsesTerminalFunctionalTerm()
[all …]
/dports/net-im/openfire/Openfire-4.7.1/xmppserver/src/test/java/org/jivesoftware/openfire/ldap/
H A DVCardTemplateTest.java220 assertTrue( Arrays.asList( result.getAttributes() ).contains( "st" ) ); in testDefaultTemplate()
227 assertTrue( Arrays.asList( result.getAttributes() ).contains( "cn" ) ); in testDefaultTemplate()
228 assertTrue( Arrays.asList( result.getAttributes() ).contains( "l" ) ); in testDefaultTemplate()
231 assertTrue( Arrays.asList( result.getAttributes() ).contains( "uid" ) ); in testDefaultTemplate()
259 assertTrue( Arrays.asList( result.getAttributes() ).contains( "st" ) ); in testCombinedTemplate()
267 assertTrue( Arrays.asList( result.getAttributes() ).contains( "cn" ) ); in testCombinedTemplate()
268 assertTrue( Arrays.asList( result.getAttributes() ).contains( "l" ) ); in testCombinedTemplate()
271 assertTrue( Arrays.asList( result.getAttributes() ).contains( "uid" ) ); in testCombinedTemplate()
302 assertTrue( Arrays.asList( result.getAttributes() ).contains( "st" ) ); in testPrioritizedTemplate()
310 assertTrue( Arrays.asList( result.getAttributes() ).contains( "cn" ) ); in testPrioritizedTemplate()
[all …]
/dports/devel/spark/spark-2.1.1/streaming/src/test/java/org/apache/spark/streaming/
H A DJavaAPISuite.java75 List<List<Integer>> inputData = Arrays.asList(Arrays.asList(1, 2, 3, 4)); in testContextState()
248 Arrays.asList(Arrays.asList("giants", "dodgers")), in testGlom()
249 Arrays.asList(Arrays.asList("yankees", "red sox"))); in testGlom()
435 List<List<Integer>> inputData = Arrays.asList(Arrays.asList(1)); in testVariousTransform()
439 Arrays.asList(Arrays.asList(new Tuple2<>("x", 1))); in testVariousTransform()
584 List<List<Integer>> inputData1 = Arrays.asList(Arrays.asList(1)); in testVariousTransformWith()
585 List<List<String>> inputData2 = Arrays.asList(Arrays.asList("x")); in testVariousTransformWith()
590 Arrays.asList(Arrays.asList(new Tuple2<>("x", 1))); in testVariousTransformWith()
592 Arrays.asList(Arrays.asList(new Tuple2<>(1.0, 'x'))); in testVariousTransformWith()
1752 List<List<Long>> expected = Arrays.asList(Arrays.asList(2L), Arrays.asList(1L)); in testLeftOuterJoin()
[all …]
/dports/devel/spark/spark-2.1.1/external/java8-tests/src/test/java/test/org/apache/spark/java8/dstream/
H A DJava8APISuite.java174 List<List<Integer>> inputData = Arrays.asList(Arrays.asList(1)); in testVariousTransform()
178 Arrays.asList(Arrays.asList(new Tuple2<>("x", 1))); in testVariousTransform()
197 Arrays.asList( in testTransformWith()
200 Arrays.asList( in testTransformWith()
205 Arrays.asList( in testTransformWith()
208 Arrays.asList( in testTransformWith()
251 List<List<Integer>> inputData1 = Arrays.asList(Arrays.asList(1)); in testVariousTransformWith()
257 Arrays.asList(Arrays.asList(new Tuple2<>("x", 1))); in testVariousTransformWith()
259 Arrays.asList(Arrays.asList(new Tuple2<>(1.0, 'x'))); in testVariousTransformWith()
459 Arrays.asList(
[all …]
/dports/devel/spark/spark-2.1.1/mllib/src/test/java/org/apache/spark/mllib/fpm/
H A DJavaPrefixSpanSuite.java36 JavaRDD<List<List<Integer>>> sequences = jsc.parallelize(Arrays.asList( in runPrefixSpan()
37 Arrays.asList(Arrays.asList(1, 2), Arrays.asList(3)), in runPrefixSpan()
38 Arrays.asList(Arrays.asList(1), Arrays.asList(3, 2), Arrays.asList(1, 2)), in runPrefixSpan()
39 Arrays.asList(Arrays.asList(1, 2), Arrays.asList(5)), in runPrefixSpan()
40 Arrays.asList(Arrays.asList(6)) in runPrefixSpan()
58 JavaRDD<List<List<Integer>>> sequences = jsc.parallelize(Arrays.asList( in runPrefixSpanSaveLoad()
59 Arrays.asList(Arrays.asList(1, 2), Arrays.asList(3)), in runPrefixSpanSaveLoad()
60 Arrays.asList(Arrays.asList(1), Arrays.asList(3, 2), Arrays.asList(1, 2)), in runPrefixSpanSaveLoad()
61 Arrays.asList(Arrays.asList(1, 2), Arrays.asList(5)), in runPrefixSpanSaveLoad()
62 Arrays.asList(Arrays.asList(6)) in runPrefixSpanSaveLoad()
/dports/devel/spark/spark-2.1.1/launcher/src/test/java/org/apache/spark/launcher/
H A DCommandBuilderUtilsSuite.java41 testOpt("a", Arrays.asList("a")); in testValidOptionStrings()
42 testOpt("aaa", Arrays.asList("aaa")); in testValidOptionStrings()
45 testOpt("a 'b c'", Arrays.asList("a", "b c")); in testValidOptionStrings()
47 testOpt("'b c'", Arrays.asList("b c")); in testValidOptionStrings()
50 testOpt("\"b c\"", Arrays.asList("b c")); in testValidOptionStrings()
56 testOpt("'a'b", Arrays.asList("ab")); in testValidOptionStrings()
57 testOpt("'a''b'", Arrays.asList("ab")); in testValidOptionStrings()
58 testOpt("\"a\"b", Arrays.asList("ab")); in testValidOptionStrings()
59 testOpt("\"a\"\"b\"", Arrays.asList("ab")); in testValidOptionStrings()
60 testOpt("''", Arrays.asList("")); in testValidOptionStrings()
[all …]
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/testutils/
H A DVariantContextTestUtilsUnitTest.java117 {Arrays.asList(1, 2, 3, 4), Arrays.asList(1, 3, 4, 2), Arrays.asList(0, 2, 3, 1)}, in getTListsToRemap()
118 {Arrays.asList(1, 2, 3, 4), Arrays.asList(1, 2, 3, 4), Arrays.asList(0, 1, 2, 3)}, in getTListsToRemap()
119 … {Arrays.asList("a", "b", "c","d"), Arrays.asList("a", "d", "c", "b"), Arrays.asList(0, 3,2,1)} in getTListsToRemap()
132 {Arrays.asList(1, 2, 3), Arrays.asList(2, 3, 1), Arrays.asList(0, 2, 3, 1)}, in getAListsToRemap()
133 {Arrays.asList(1, 2, 3), Arrays.asList(1, 2, 3), Arrays.asList(0, 1, 2, 3)}, in getAListsToRemap()
134 … {Arrays.asList("a", "b", "c"), Arrays.asList("c", "b" , "a"), Arrays.asList(0, 3, 2, 1)} in getAListsToRemap()
147 … {Arrays.asList(0,1,2), Arrays.asList(2,1,0), Arrays.asList(ARef, T), Arrays.asList(T, ARef), 2}, in getGListsToRemap()
148 …{Arrays.asList(0,1,2,3,4,5), Arrays.asList(2,1,0,4,3,5), Arrays.asList(ARef, T, C), Arrays.asList(… in getGListsToRemap()
160 {"1|2|3|4", "1|3|4|2", Arrays.asList(0, 2, 3, 1)}, in getASTListsToRemap()
161 {"|1, 2|3, 4", "|3, 4|1, 2", Arrays.asList(0, 2, 1)}, in getASTListsToRemap()
[all …]
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/utils/iterators/
H A DSamReaderQueryingIteratorUnitTest.java33 …{ unmappedBam, Arrays.asList(new SimpleInterval("1", 200, 1000)), false, Arrays.asList("a", "b", "… in samReaderQueryingIteratorTestData()
35 …{ unmappedBam, Arrays.asList(new SimpleInterval("1", 200, 1000)), true, Arrays.asList("a", "b", "c… in samReaderQueryingIteratorTestData()
37 …, Arrays.asList(new SimpleInterval("1", 200, 1000), new SimpleInterval("2", 500, 700), new SimpleI… in samReaderQueryingIteratorTestData()
39 …m, Arrays.asList(new SimpleInterval("1", 200, 1000), new SimpleInterval("2", 500, 700), new Simple… in samReaderQueryingIteratorTestData()
43 …{ unmappedBam, Arrays.asList(new SimpleInterval("1", 3000, 4000)), true, Arrays.asList("u1", "u2",… in samReaderQueryingIteratorTestData()
47 …{ mappedBam, Arrays.asList(new SimpleInterval("1", 200, 1000)), true, Arrays.asList("a", "b", "c",… in samReaderQueryingIteratorTestData()
49 { unmappedBam, null, true, Arrays.asList("u1", "u2", "u3", "u4", "u5") }, in samReaderQueryingIteratorTestData()
61 …{ ceuSnippet, Arrays.asList(new SimpleInterval("20", 10000011, 10000013)), false, Arrays.asList("a… in samReaderQueryingIteratorTestData()
63 …{ ceuSnippet, Arrays.asList(new SimpleInterval("20", 10000011, 10000013)), true, Arrays.asList("a"… in samReaderQueryingIteratorTestData()
65 …{ ceuSnippet, Arrays.asList(new SimpleInterval("20", 10000009, 10000011)), false, Arrays.asList("a… in samReaderQueryingIteratorTestData()
[all …]
/dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/walkers/haplotypecaller/graphs/
H A DSharedVertexSequenceSplitterUnitTest.java22 tests.add(new Object[]{Arrays.asList("A", "C"), 0, 0}); in makePrefixSuffixData()
23 tests.add(new Object[]{Arrays.asList("C", "C"), 1, 0}); in makePrefixSuffixData()
24 tests.add(new Object[]{Arrays.asList("ACT", "AGT"), 1, 1}); in makePrefixSuffixData()
25 tests.add(new Object[]{Arrays.asList("ACCT", "AGT"), 1, 1}); in makePrefixSuffixData()
26 tests.add(new Object[]{Arrays.asList("ACT", "ACT"), 3, 0}); in makePrefixSuffixData()
27 tests.add(new Object[]{Arrays.asList("ACTA", "ACT"), 3, 0}); in makePrefixSuffixData()
28 tests.add(new Object[]{Arrays.asList("ACTA", "ACTG"), 3, 0}); in makePrefixSuffixData()
29 tests.add(new Object[]{Arrays.asList("ACTA", "ACTGA"), 3, 1}); in makePrefixSuffixData()
32 tests.add(new Object[]{Arrays.asList("A", "C", "A"), 0, 0}); in makePrefixSuffixData()
33 tests.add(new Object[]{Arrays.asList("A", "A", "A"), 1, 0}); in makePrefixSuffixData()
[all …]
/dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/test/jdk/java/net/httpclient/http2/java.net.http/jdk/internal/net/http/hpack/
H A DEncoderTest.java526 testSizeUpdate(e, 1024, asList(), asList(0)); in initialSizeUpdateDefaultEncoder()
527 testSizeUpdate(e, 1024, asList(1024), asList(0)); in initialSizeUpdateDefaultEncoder()
537 testSizeUpdate(e, 1024, asList(), asList(1024)); in initialSizeUpdateCustomEncoder()
538 testSizeUpdate(e, 1024, asList(1024), asList(1024)); in initialSizeUpdateCustomEncoder()
552 testSizeUpdate(e, 0, asList(0), asList()); in seriesOfSizeUpdatesDefaultEncoder()
553 testSizeUpdate(e, 1024, asList(1024), asList()); in seriesOfSizeUpdatesDefaultEncoder()
554 testSizeUpdate(e, 1024, asList(2048), asList()); in seriesOfSizeUpdatesDefaultEncoder()
555 testSizeUpdate(e, 1024, asList(512), asList()); in seriesOfSizeUpdatesDefaultEncoder()
573 testSizeUpdate(e, 0, asList(0), asList()); in seriesOfSizeUpdatesCustomEncoder()
574 testSizeUpdate(e, 1024, asList(1024), asList()); in seriesOfSizeUpdatesCustomEncoder()
[all …]
/dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/test/jdk/java/net/httpclient/http2/java.net.http/jdk/internal/net/http/hpack/
H A DEncoderTest.java526 testSizeUpdate(e, 1024, asList(), asList(0)); in initialSizeUpdateDefaultEncoder()
527 testSizeUpdate(e, 1024, asList(1024), asList(0)); in initialSizeUpdateDefaultEncoder()
537 testSizeUpdate(e, 1024, asList(), asList(1024)); in initialSizeUpdateCustomEncoder()
538 testSizeUpdate(e, 1024, asList(1024), asList(1024)); in initialSizeUpdateCustomEncoder()
552 testSizeUpdate(e, 0, asList(0), asList()); in seriesOfSizeUpdatesDefaultEncoder()
553 testSizeUpdate(e, 1024, asList(1024), asList()); in seriesOfSizeUpdatesDefaultEncoder()
554 testSizeUpdate(e, 1024, asList(2048), asList()); in seriesOfSizeUpdatesDefaultEncoder()
555 testSizeUpdate(e, 1024, asList(512), asList()); in seriesOfSizeUpdatesDefaultEncoder()
573 testSizeUpdate(e, 0, asList(0), asList()); in seriesOfSizeUpdatesCustomEncoder()
574 testSizeUpdate(e, 1024, asList(1024), asList()); in seriesOfSizeUpdatesCustomEncoder()
[all …]
/dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/test/jdk/java/net/httpclient/http2/java.net.http/jdk/internal/net/http/hpack/
H A DEncoderTest.java526 testSizeUpdate(e, 1024, asList(), asList(0)); in initialSizeUpdateDefaultEncoder()
527 testSizeUpdate(e, 1024, asList(1024), asList(0)); in initialSizeUpdateDefaultEncoder()
537 testSizeUpdate(e, 1024, asList(), asList(1024)); in initialSizeUpdateCustomEncoder()
538 testSizeUpdate(e, 1024, asList(1024), asList(1024)); in initialSizeUpdateCustomEncoder()
552 testSizeUpdate(e, 0, asList(0), asList()); in seriesOfSizeUpdatesDefaultEncoder()
553 testSizeUpdate(e, 1024, asList(1024), asList()); in seriesOfSizeUpdatesDefaultEncoder()
554 testSizeUpdate(e, 1024, asList(2048), asList()); in seriesOfSizeUpdatesDefaultEncoder()
555 testSizeUpdate(e, 1024, asList(512), asList()); in seriesOfSizeUpdatesDefaultEncoder()
573 testSizeUpdate(e, 0, asList(0), asList()); in seriesOfSizeUpdatesCustomEncoder()
574 testSizeUpdate(e, 1024, asList(1024), asList()); in seriesOfSizeUpdatesCustomEncoder()
[all …]
/dports/java/openjdk12/openjdk-jdk12u-jdk-12.0.2-10-4/test/jdk/java/net/httpclient/http2/java.net.http/jdk/internal/net/http/hpack/
H A DEncoderTest.java526 testSizeUpdate(e, 1024, asList(), asList(0)); in initialSizeUpdateDefaultEncoder()
527 testSizeUpdate(e, 1024, asList(1024), asList(0)); in initialSizeUpdateDefaultEncoder()
537 testSizeUpdate(e, 1024, asList(), asList(1024)); in initialSizeUpdateCustomEncoder()
538 testSizeUpdate(e, 1024, asList(1024), asList(1024)); in initialSizeUpdateCustomEncoder()
552 testSizeUpdate(e, 0, asList(0), asList()); in seriesOfSizeUpdatesDefaultEncoder()
553 testSizeUpdate(e, 1024, asList(1024), asList()); in seriesOfSizeUpdatesDefaultEncoder()
554 testSizeUpdate(e, 1024, asList(2048), asList()); in seriesOfSizeUpdatesDefaultEncoder()
555 testSizeUpdate(e, 1024, asList(512), asList()); in seriesOfSizeUpdatesDefaultEncoder()
573 testSizeUpdate(e, 0, asList(0), asList()); in seriesOfSizeUpdatesCustomEncoder()
574 testSizeUpdate(e, 1024, asList(1024), asList()); in seriesOfSizeUpdatesCustomEncoder()
[all …]
/dports/java/openjdk15/jdk15u-jdk-15.0.6-1-1/test/jdk/java/net/httpclient/http2/java.net.http/jdk/internal/net/http/hpack/
H A DEncoderTest.java526 testSizeUpdate(e, 1024, asList(), asList(0)); in initialSizeUpdateDefaultEncoder()
527 testSizeUpdate(e, 1024, asList(1024), asList(0)); in initialSizeUpdateDefaultEncoder()
537 testSizeUpdate(e, 1024, asList(), asList(1024)); in initialSizeUpdateCustomEncoder()
538 testSizeUpdate(e, 1024, asList(1024), asList(1024)); in initialSizeUpdateCustomEncoder()
552 testSizeUpdate(e, 0, asList(0), asList()); in seriesOfSizeUpdatesDefaultEncoder()
553 testSizeUpdate(e, 1024, asList(1024), asList()); in seriesOfSizeUpdatesDefaultEncoder()
554 testSizeUpdate(e, 1024, asList(2048), asList()); in seriesOfSizeUpdatesDefaultEncoder()
555 testSizeUpdate(e, 1024, asList(512), asList()); in seriesOfSizeUpdatesDefaultEncoder()
573 testSizeUpdate(e, 0, asList(0), asList()); in seriesOfSizeUpdatesCustomEncoder()
574 testSizeUpdate(e, 1024, asList(1024), asList()); in seriesOfSizeUpdatesCustomEncoder()
[all …]
/dports/java/openjdk16/jdk16u-jdk-16.0.2-7-1/test/jdk/java/net/httpclient/http2/java.net.http/jdk/internal/net/http/hpack/
H A DEncoderTest.java526 testSizeUpdate(e, 1024, asList(), asList(0));
527 testSizeUpdate(e, 1024, asList(1024), asList(0));
537 testSizeUpdate(e, 1024, asList(), asList(1024));
538 testSizeUpdate(e, 1024, asList(1024), asList(1024));
552 testSizeUpdate(e, 0, asList(0), asList());
553 testSizeUpdate(e, 1024, asList(1024), asList());
554 testSizeUpdate(e, 1024, asList(2048), asList());
555 testSizeUpdate(e, 1024, asList(512), asList());
573 testSizeUpdate(e, 0, asList(0), asList()); in corruptedHeaderBlockHuffmanStringLongPadding2()
574 testSizeUpdate(e, 1024, asList(1024), asList()); in corruptedHeaderBlockHuffmanStringLongPadding2()
[all …]

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