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Searched refs:b_rep_score_ (Results 1 – 2 of 2) sorted by relevance

/dports/biology/viennarna/ViennaRNA-2.4.18/src/RNAforester/src/
H A Drna_algebra.cpp12 b_rep_score_(0), in Score()
23 b_rep_score_ = 1; in Score()
39 b_rep_score_ = 0; in Score()
52 options.get(Options::BRepScore,b_rep_score_,b_rep_score_); in Score()
70 b_rep_score_ = s.b_rep_score_; in Score()
104 out << "base replacement: " << score.b_rep_score_ << std::endl; in operator <<()
H A Drna_algebra.h40 double b_rep_score_; variable
123 result += s_.b_rep_score_; in deletePairOnly()
128 result += s_.b_rep_score_; in deletePairOnly()
149 result += s_.b_rep_score_; in deletePairAndLeftBase()
159 result += s_.b_rep_score_; in deletePairAndRightBase()
182 result += s_.b_rep_score_; in insertPairOnly()
189 result += s_.b_rep_score_; in insertPairOnly()
211 result += s_.b_rep_score_; in insertPairAndLeftBase()
221 result += s_.b_rep_score_; in insertPairAndRightBase()
358 result += s_.b_rep_score_; in deletePairAndRightBase()
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