Searched refs:badAlign (Results 1 – 3 of 3) sorted by relevance
104 if (auto badAlign = (size % componentAlign)) { in RuntimeComposerMetadata() local105 size += (componentAlign - badAlign); in RuntimeComposerMetadata()
70 - noSeq.size() - badAlign.size() - numRedundant - oldNewPairs.size(); in toString()88 result += toString(badAlign, "Alignments that are corrupted or do not match with the CD"); in toString()379 unsigned numNoAlignment = getStats().badAlign.size(); in processBlastHits()581 unsigned numNoAlignment = getStats().badAlign.size(); in checkBlastAndUpdate()768 m_stats.badAlign.push_back(gi); in update()787 m_stats.badAlign.push_back(gi); in update()
80 vector<TGi> badAlign; member