| /dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/walkers/bqsr/ |
| H A D | AnalyzeCovariates.java | 143 protected File beforeFile = null; field in AnalyzeCovariates
212 checkInputReportFile("before",beforeFile); in checkArgumentsValues()
214 if (BQSR_RECAL_FILE == null && beforeFile == null && afterFile == null) { in checkArgumentsValues()
222 checkInputReportFileLMT(beforeFile,afterFile); in checkArgumentsValues()
234 private void checkInputReportFileLMT(final File beforeFile, final File afterFile) { in checkInputReportFileLMT() argument
236 if (ignoreLastModificationTime || beforeFile == null || afterFile == null) { in checkInputReportFileLMT()
238 } else if (beforeFile.lastModified() > afterFile.lastModified()) { in checkInputReportFileLMT()
411 if (beforeFile != null) { in buildReportFileMap()
412 reports.put("Before",beforeFile); in buildReportFileMap()
|
| /dports/devel/lazygit/lazygit-0.31.4/pkg/commands/ |
| H A D | files.go | 77 var beforeFile *models.File
81 beforeFile = f
89 if beforeFile == nil || afterFile == nil {
93 if beforeFile.IsRename() || afterFile.IsRename() {
98 return beforeFile, afterFile, nil
104 beforeFile, afterFile, err := c.BeforeAndAfterFileForRename(file)
109 if err := c.DiscardAllFileChanges(beforeFile); err != nil {
|
| /dports/x11-toolkits/qt5-datavis3d/kde-qtdatavis3d-5.15.2p2/src/datavisualizationqml2/ |
| H A D | glstatestore.cpp | 36 static QFile *beforeFile = 0; variable
52 if (!beforeFile) { in GLStateStore()
53 beforeFile = new QFile(QStringLiteral("state_before.txt")); in GLStateStore()
55 beforeFile->open(QIODevice::WriteOnly); in GLStateStore()
57 QDebug beforeInit(beforeFile); in GLStateStore()
141 file = beforeFile; in printCurrentState()
|
| /dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/walkers/bqsr/ |
| H A D | AnalyzeCovariatesIntegrationTest.java | 244 final File beforeFile, final File afterFile) { in buildCommandLine() argument
261 if (beforeFile != null) { in buildCommandLine()
263 args.add("'" + beforeFile.getAbsolutePath() + "'"); in buildCommandLine()
|
| /dports/java/eclipse/eclipse.platform.releng.aggregator-R4_16/eclipse.platform.resources/tests/org.eclipse.core.tests.resources/src/org/eclipse/core/tests/resources/ |
| H A D | IFolderTest.java | 31 IFile beforeFile = before.getFile("file"); in testChangeCase() local
37 beforeFile.create(getRandomContents(), false, getMonitor()); in testChangeCase()
44 assertExistsInWorkspace("1.1", beforeFile); in testChangeCase()
54 assertDoesNotExistInWorkspace("1.3", beforeFile); in testChangeCase()
|
| /dports/java/openjdk8/jdk8u-jdk8u312-b07.1/jdk/test/java/util/Currency/ |
| H A D | PropertiesTest.java | 73 private static void compare(String beforeFile, String afterFile, String propsFile) in compare() argument
78 try (Reader reader = new FileReader(beforeFile)) { in compare()
|
| /dports/java/openjdk8-jre/jdk8u-jdk8u312-b07.1/jdk/test/java/util/Currency/ |
| H A D | PropertiesTest.java | 73 private static void compare(String beforeFile, String afterFile, String propsFile) in compare() argument
78 try (Reader reader = new FileReader(beforeFile)) { in compare()
|
| /dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/test/jdk/java/util/Currency/ |
| H A D | PropertiesTest.java | 81 private static void compare(String beforeFile, String afterFile, String propsFile) in compare() argument
86 try (Reader reader = new FileReader(beforeFile)) { in compare()
|
| /dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/test/jdk/java/util/Currency/ |
| H A D | PropertiesTest.java | 81 private static void compare(String beforeFile, String afterFile, String propsFile) in compare() argument
86 try (Reader reader = new FileReader(beforeFile)) { in compare()
|
| /dports/java/openjdk12/openjdk-jdk12u-jdk-12.0.2-10-4/test/jdk/java/util/Currency/ |
| H A D | PropertiesTest.java | 81 private static void compare(String beforeFile, String afterFile, String propsFile) in compare() argument
86 try (Reader reader = new FileReader(beforeFile)) { in compare()
|
| /dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/test/jdk/java/util/Currency/ |
| H A D | PropertiesTest.java | 81 private static void compare(String beforeFile, String afterFile, String propsFile) in compare() argument
86 try (Reader reader = new FileReader(beforeFile)) { in compare()
|
| /dports/java/openjdk15/jdk15u-jdk-15.0.6-1-1/test/jdk/java/util/Currency/ |
| H A D | PropertiesTest.java | 81 private static void compare(String beforeFile, String afterFile, String propsFile) in compare() argument
86 try (Reader reader = new FileReader(beforeFile)) { in compare()
|
| /dports/java/openjdk16/jdk16u-jdk-16.0.2-7-1/test/jdk/java/util/Currency/ |
| H A D | PropertiesTest.java | 81 private static void compare(String beforeFile, String afterFile, String propsFile) in compare() argument
86 try (Reader reader = new FileReader(beforeFile)) { in compare()
|
| /dports/java/openjdk14/jdk14u-jdk-14.0.2-12-1/test/jdk/java/util/Currency/ |
| H A D | PropertiesTest.java | 81 private static void compare(String beforeFile, String afterFile, String propsFile) in compare() argument
86 try (Reader reader = new FileReader(beforeFile)) { in compare()
|
| /dports/java/openjdk17/jdk17u-jdk-17.0.1-12-1/test/jdk/java/util/Currency/ |
| H A D | PropertiesTest.java | 81 private static void compare(String beforeFile, String afterFile, String propsFile) in compare() argument
86 try (Reader reader = new FileReader(beforeFile)) { in compare()
|
| /dports/mail/mailscanner/MailScanner-5.3.4/usr/lib/MailScanner/wrapper/ |
| H A D | bitdefender-autoupdate | 135 my $beforeFile = "beforeupdate.txt"; # list of viruses before update
|
| /dports/finance/moneymanagerex/bakefile-0.2.9/src/empy/ |
| H A D | em.py | 991 def beforeFile(self, name, file, locals): pass member in Hook
|
| /dports/textproc/py-empy/empy-3.3.3/ |
| H A D | em.py | 1008 def beforeFile(self, name, file, locals): pass member in Hook
|