Searched refs:besthitsSeed (Results 1 – 1 of 1) sorted by relevance
| /dports/biology/fasttree/FastTree-2.1.10_5/ |
| H A D | FastTree-2.1.10.c | 7744 besthit_t *besthitsSeed = (besthit_t*)mymalloc(sizeof(besthit_t)*NJ->nSeq); in SetAllLeafTopHits() local
7749 SetBestHit(seed, NJ, /*nActive*/NJ->nSeq, /*OUT*/&bestjoin, /*OUT*/besthitsSeed); in SetAllLeafTopHits()
7752 SortSaveBestHits(seed, /*IN/SORT*/besthitsSeed, /*IN-SIZE*/NJ->nSeq, in SetAllLeafTopHits()
7757 double neardist = besthitsSeed[2 * tophits->m - 1].dist * close; in SetAllLeafTopHits()
7767 nearweight += besthitsSeed[iClose].weight; in SetAllLeafTopHits()
7775 besthit_t *closehit = &besthitsSeed[iClose]; in SetAllLeafTopHits()
7794 /*IN*/besthitsSeed, /*SIZE*/nUse, in SetAllLeafTopHits()
7806 closeNode, iClose, besthitsSeed[iClose].weight, in SetAllLeafTopHits()
7813 /*IN*/besthitsSeed, /*SIZE*/2 * tophits->m, in SetAllLeafTopHits()
7848 besthitsSeed = myfree(besthitsSeed, sizeof(besthit_t)*NJ->nSeq); in SetAllLeafTopHits()
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