Searched refs:bin_extractor (Results 1 – 2 of 2) sorted by relevance
| /dports/biology/groopm/GroopM-0.3.4/bin/ |
| H A D | groopm | 171 bin_extractor = subparsers.add_parser('extract',
175 bin_extractor.add_argument('dbname', help="name of the database to open")
176 bin_extractor.add_argument('data', nargs='+', help="data file(s) to extract from, bam or fasta")
177 …bin_extractor.add_argument('-b', '--bids', nargs='+', type=int, default=None, help="bin ids to use…
178 …bin_extractor.add_argument('-m', '--mode', default="contigs", help="what to extract [reads, contig…
179 …bin_extractor.add_argument('-o', '--out_folder', default="", help="write to this folder (None for …
180 bin_extractor.add_argument('-p', '--prefix', default="", help="prefix to apply to output files")
189 …bin_extractor.add_argument('--no_gzip', action="store_true", default=False, help="do not gzip outp…
191 …bin_extractor.add_argument('--mapping_quality', type=int, default=0, help=">>READ MODE ONLY<< mapp…
196 …bin_extractor.add_argument('-v', '--verbose', action="store_true", default=False, help=">>READ MOD…
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| /dports/devel/nuitka/Nuitka-0.6.17/nuitka/optimizations/ |
| H A D | OptimizeBuiltinCalls.py | 370 def bin_extractor(node): function
1349 "bin": bin_extractor,
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