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Searched refs:bitvec_and (Results 1 – 10 of 10) sorted by relevance

/dports/biology/plink/plink-ng-79b2df8c/1.9/
H A Dplink_dosage.c944 bitvec_and(sex_nm, unfiltered_sample_ctl, pheno_nm); in plink1_dosage()
1072 bitvec_and(pheno_nm, unfiltered_sample_ctl, pheno_c); in plink1_dosage()
1079 bitvec_and(sex_nm, unfiltered_sample_ctl, sex_male); in plink1_dosage()
1921 bitvec_and(covar_nm, sample_ctl, cur_samples); in plink1_dosage()
H A Dplink_misc.c2719 bitvec_and(ulptr, unfiltered_sample_ctl2, case_include2); in write_cc_freqs()
2720 bitvec_and(ulptr, unfiltered_sample_ctl2, ctrl_include2); in write_cc_freqs()
2721 bitvec_and(ulptr, unfiltered_sample_ctl2, male_vec); in write_cc_freqs()
2722 bitvec_and(ulptr, unfiltered_sample_ctl2, nonmale_vec); in write_cc_freqs()
3266 bitvec_and(sex_nm, unfiltered_sample_ctl, sex_male); in sexcheck()
3827 bitvec_and(founder_vec11, sample_ctl2, loadbuf_f); in het_report()
H A Dplink.c1074 bitvec_and(sex_nm, unfiltered_sample_ctl, pheno_nm); in plink()
1261 bitvec_and(pheno_nm, unfiltered_sample_ctl, pheno_c); in plink()
1268 bitvec_and(sex_nm, unfiltered_sample_ctl, sex_male); in plink()
1401 bitvec_and(sex_nm, unfiltered_sample_ctl, sex_male); in plink()
1406 bitvec_and(pheno_nm, unfiltered_sample_ctl, pheno_c); in plink()
1497 bitvec_and(sex_nm, unfiltered_sample_ctl, sex_male); in plink()
1502 bitvec_and(pheno_nm, unfiltered_sample_ctl, pheno_c); in plink()
1612 bitvec_and(sex_nm, unfiltered_sample_ctl, pheno_nm_datagen); in plink()
2004 bitvec_and(sex_nm, unfiltered_sample_ctl, pheno_nm); in plink()
2019 bitvec_and(pheno_nm, unfiltered_sample_ctl, pheno_c); in plink()
H A Dplink_glm.c3706 bitvec_and(sex_nm, unfiltered_sample_ctl, load_mask); in glm_common_init()
4160 bitvec_and(unstopped_markers, marker_ctl, regression_skip); in glm_linear_assoc_set_test()
4512 bitvec_and(founder_info, unfiltered_sample_ctl, founder_pnm); in glm_linear_assoc()
5711 bitvec_and(unstopped_markers, marker_ctl, regression_skip); in glm_logistic_assoc_set_test()
6039 bitvec_and(founder_info, unfiltered_sample_ctl, founder_pnm); in glm_logistic_assoc()
7209 bitvec_and(sex_nm, unfiltered_sample_ctl, load_mask); in glm_linear_nosnp()
8070 bitvec_and(sex_nm, unfiltered_sample_ctl, load_mask); in glm_logistic_nosnp()
H A Dplink_family.c2706 bitvec_and(founder_info, unfiltered_sample_ctl, tmp_within2_founder); in get_sibship_info()
2719 bitvec_and(pheno_nm, unfiltered_sample_ctl, ulptr); in get_sibship_info()
2824 bitvec_and(ulptr, unfiltered_sample_ctl, *size_one_sibships_ptr); in get_sibship_info()
3971 bitvec_and(founder_info, unfiltered_sample_ctl, founder_pnm); in dfam()
H A Dplink_set.c1205 bitvec_and(marker_bitfield_tmp, unfiltered_marker_ctl, marker_exclude_new); in define_sets()
1273 bitvec_and(marker_bitfield_tmp, unfiltered_marker_ctl, marker_exclude_new); in define_sets()
H A Dplink_ld.c1567 bitvec_and(pheno_nm, unfiltered_sample_ctl, founder_phenos[0]); in flipscan()
1572 bitvec_and(pheno_c, unfiltered_sample_ctl, founder_phenos[1]); in flipscan()
5158 bitvec_and(sex_male, founder_ctv3, cur_geno1_male); in ld_dprime_thread()
5160 bitvec_and(sex_male, founder_ctv3, &(cur_geno1_male[founder_ctv3])); in ld_dprime_thread()
5162 bitvec_and(sex_male, founder_ctv3, &(cur_geno1_male[2 * founder_ctv3])); in ld_dprime_thread()
7211 bitvec_and(pheno_nm, unfiltered_sample_ctl, founder_pnm); in haploview_blocks()
10599 bitvec_and(sex_male_collapsed, founder_ctv3, cur_geno1_male); in indep_pairphase()
10601 bitvec_and(sex_male_collapsed, founder_ctv3, &(cur_geno1_male[founder_ctv3])); in indep_pairphase()
10603 bitvec_and(sex_male_collapsed, founder_ctv3, &(cur_geno1_male[2 * founder_ctv3])); in indep_pairphase()
H A Dplink_assoc.c6164 bitvec_and(founder_info, unfiltered_sample_ctl, founder_pnm); in model_assoc()
6474 bitvec_and(sample_case_include2, pheno_nm_ctv2, sample_male_case_include2); in model_assoc()
7896 bitvec_and(unstopped_markers, marker_ctl, regression_skip); in qassoc_set_test()
8202 bitvec_and(founder_info, unfiltered_sample_ctl, founder_pnm); in qassoc()
10110 bitvec_and(sex_male, unfiltered_sample_ctl, pheno_male_nm2); in testmiss()
10473 bitvec_and(sex_male_collapsed, pheno_nm_ctl, loadbuf_ptr); in testmiss()
H A Dplink_common.h2451 void bitvec_and(const uintptr_t* __restrict arg_bitvec, uintptr_t word_ct, uintptr_t* __restrict ma…
H A Dplink_common.c5768 void bitvec_and(const uintptr_t* __restrict arg_bitvec, uintptr_t word_ct, uintptr_t* __restrict ma… in bitvec_and() function