Searched refs:block_seq_len (Results 1 – 4 of 4) sorted by relevance
| /dports/biology/infernal/infernal-1.1.3/easel/ |
| H A D | esl_msafile_psiblast.c | 195 esl_pos_t block_seq_start, block_seq_len; in esl_msafile_psiblast_Read() local
226 block_seq_len = seq_len; in esl_msafile_psiblast_Read()
229 if (seq_len != block_seq_len) ESL_XFAIL(eslEFORMAT, afp->errmsg, "sequence end is misaligned"); in esl_msafile_psiblast_Read()
278 alen += block_seq_len; in esl_msafile_psiblast_Read()
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| H A D | esl_msafile_clustal.c | 203 esl_pos_t block_seq_start, block_seq_len; in esl_msafile_clustal_Read() local
245 block_seq_len = seq_len; in esl_msafile_clustal_Read()
248 if (seq_len != block_seq_len) ESL_XFAIL(eslEFORMAT, afp->errmsg, "sequence end is misaligned"); in esl_msafile_clustal_Read()
287 alen += block_seq_len; in esl_msafile_clustal_Read()
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| /dports/biology/hmmer/hmmer-3.3/easel/ |
| H A D | esl_msafile_psiblast.c | 195 esl_pos_t block_seq_start, block_seq_len; in esl_msafile_psiblast_Read() local
226 block_seq_len = seq_len; in esl_msafile_psiblast_Read()
229 if (seq_len != block_seq_len) ESL_XFAIL(eslEFORMAT, afp->errmsg, "sequence end is misaligned"); in esl_msafile_psiblast_Read()
278 alen += block_seq_len; in esl_msafile_psiblast_Read()
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| H A D | esl_msafile_clustal.c | 203 esl_pos_t block_seq_start, block_seq_len; in esl_msafile_clustal_Read() local
245 block_seq_len = seq_len; in esl_msafile_clustal_Read()
248 if (seq_len != block_seq_len) ESL_XFAIL(eslEFORMAT, afp->errmsg, "sequence end is misaligned"); in esl_msafile_clustal_Read()
287 alen += block_seq_len; in esl_msafile_clustal_Read()
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