Searched refs:bma2 (Results 1 – 2 of 2) sorted by relevance
758 const BlockMultipleAlignment* bma2 = blockEd.GetAlignment(); in DoPhase() local760 au->SetBlockMultipleAlignment(bma2); in DoPhase()762 if (m_saveBlockScores && bma2) { in DoPhase()763 for (unsigned int j = 0; j < bma2->NRows(); ++j) { in DoPhase()
486 double bma2, bma3; in interp() local552 bma2 = bma * bma; in interp()564 pv[i + ncm * 2] *= bma2; in interp()570 bma3 = bma * bma2; in interp()