Searched refs:bp_indel_score_ (Results 1 – 2 of 2) sorted by relevance
9 bp_indel_score_(0), in Score()21 bp_indel_score_ = 3; in Score()32 bp_indel_score_ =-100; in Score()37 bp_indel_score_ =-5; in Score()50 options.get(Options::BpDelScore,bp_indel_score_,bp_indel_score_); in Score()67 bp_indel_score_ = s.bp_indel_score_; in Score()95 out << "pair indel: " << score.bp_indel_score_ << std::endl; in operator <<()102 out << "pair indel: " << score.bp_indel_score_ << std::endl; in operator <<()
37 double bp_indel_score_; variable119 double result = s_.bp_indel_score_; in deletePairOnly()134 double result = s_.bp_indel_score_; in deletePairAndBases()143 double result = s_.bp_indel_score_; in deletePairAndLeftBase()155 double result = s_.bp_indel_score_; in deletePairAndRightBase()196 double result = s_.bp_indel_score_; in insertPairAndBases()205 double result = s_.bp_indel_score_; in insertPairAndLeftBase()217 double result = s_.bp_indel_score_; in insertPairAndRightBase()310 double result = s_.bp_indel_score_; in deletePairOnly()354 double result = s_.bp_indel_score_; in deletePairAndRightBase()[all …]