Searched refs:bqr_den (Results 1 – 9 of 9) sorted by relevance
| /dports/biology/vt/vt-0.57721/ |
| H A D | indel_genotyping_record.h | 62 float bqr_num, bqr_den; variable
|
| H A D | vntr_genotyping_record.h | 68 float bqr_num, bqr_den; variable
|
| H A D | snp_genotyping_record.h | 84 float bqr_num, bqr_den; variable
|
| H A D | complex_genotyping_record.h | 85 float bqr_num, bqr_den; variable
|
| H A D | genotyping_record.h | 109 float bqr_num, bqr_den; variable
|
| H A D | vntr_genotyping_record.cpp | 95 bqr_num = bqr_den = 0; in clear()
292 bqr_num /= sqrt(bqr_den+1e-6); bcf_update_info_float(hdr, nv, "BQZ", &bqr_num, 1); in flush_variant()
359 bqr_num += (bqr * w_dp_ra); bqr_den += (w_dp_ra * w_dp_ra); in flush_sample()
|
| H A D | snp_genotyping_record.cpp | 114 bqr_num = bqr_den = 0; in clear()
299 bqr_num /= sqrt(bqr_den+1e-6); bcf_update_info_float(hdr, nv, "BQZ", &bqr_num, 1); in flush_variant()
362 bqr_num += (bqr * w_dp_ra); bqr_den += (w_dp_ra * w_dp_ra); in flush_sample()
|
| H A D | indel_genotyping_record.cpp | 116 bqr_num = bqr_den = 0; in clear()
312 bqr_num /= sqrt(bqr_den+1e-6); bcf_update_info_float(hdr, nv, "BQZ", &bqr_num, 1); in flush_variant()
375 bqr_num += (bqr * w_dp_ra); bqr_den += (w_dp_ra * w_dp_ra); in flush_sample()
|
| H A D | complex_genotyping_record.cpp | 152 bqr_num = bqr_den = 0; in clear()
348 bqr_num /= sqrt(bqr_den+1e-6); bcf_update_info_float(hdr, nv, "BQZ", &bqr_num, 1); in flush_variant()
411 bqr_num += (bqr * w_dp_ra); bqr_den += (w_dp_ra * w_dp_ra); in flush_sample()
|