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Searched refs:bv_blocks (Results 1 – 9 of 9) sorted by relevance

/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/util/bitset/
H A Dbmsparsevec_parallel.h127 sim_model.bv_blocks.clear(true); in build_plan()
129 sim_model.bv_blocks); in build_plan()
131 typename bvector_type::size_type nb_count = sim_model.bv_blocks.count(); in build_plan()
135 typename bvector_type::enumerator en(sim_model.bv_blocks); in build_plan()
H A Dbmxor.h699 void fill_alloc_digest(bvector_type& bv_blocks) const in fill_alloc_digest() argument
705 ref_bvects_[i]->fill_alloc_digest(bv_blocks); in fill_alloc_digest()
707 bv_blocks.optimize(tb); in fill_alloc_digest()
762 bvector_type& bv_blocks) const in build_nb_digest_and_xor_matrix() argument
764 fill_alloc_digest(bv_blocks); in build_nb_digest_and_xor_matrix()
765 size_type cnt = bv_blocks.count(); in build_nb_digest_and_xor_matrix()
804 bvector_type bv_blocks; ///< blocks digest member
1454 sim_model.bv_blocks.clear(false); in compute_sim_model()
1456 sim_model.bv_blocks); in compute_sim_model()
1460 typename bvector_type::enumerator en(sim_model.bv_blocks); in compute_sim_model()
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H A Dbm.h1916 void fill_alloc_digest(bvector<Alloc>& bv_blocks) const;
2349 bvector<Alloc>* bv_blocks) const in build_rs_index() argument
2352 if (bv_blocks) in build_rs_index()
2354 bv_blocks->clear(); in build_rs_index()
2355 bv_blocks->init(); in build_rs_index()
2398 if (bv_blocks) in build_rs_index()
2402 bv_blocks->set_range_no_check(nb_from, nb_to); in build_rs_index()
2419 if (bv_blocks && cnt) in build_rs_index()
2421 bv_blocks->set(i * bm::set_sub_array_size + j); in build_rs_index()
3539 bv_blocks.init(); in fill_alloc_digest()
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H A Dbmserial.h2854 bool nb_indexed = sim_model_->bv_blocks.test(i); in serialize()
2859 size_type rank = sim_model_->bv_blocks.count_range(0, i); in serialize()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/util/bitset/
H A Dbmsparsevec_parallel.h127 sim_model.bv_blocks.clear(true); in build_plan()
129 sim_model.bv_blocks); in build_plan()
131 typename bvector_type::size_type nb_count = sim_model.bv_blocks.count(); in build_plan()
135 typename bvector_type::enumerator en(sim_model.bv_blocks); in build_plan()
H A Dbmxor.h699 void fill_alloc_digest(bvector_type& bv_blocks) const in fill_alloc_digest() argument
705 ref_bvects_[i]->fill_alloc_digest(bv_blocks); in fill_alloc_digest()
707 bv_blocks.optimize(tb); in fill_alloc_digest()
762 bvector_type& bv_blocks) const in build_nb_digest_and_xor_matrix() argument
764 fill_alloc_digest(bv_blocks); in build_nb_digest_and_xor_matrix()
765 size_type cnt = bv_blocks.count(); in build_nb_digest_and_xor_matrix()
804 bvector_type bv_blocks; ///< blocks digest member
1454 sim_model.bv_blocks.clear(false); in compute_sim_model()
1456 sim_model.bv_blocks); in compute_sim_model()
1460 typename bvector_type::enumerator en(sim_model.bv_blocks); in compute_sim_model()
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H A Dbm.h1916 void fill_alloc_digest(bvector<Alloc>& bv_blocks) const;
2349 bvector<Alloc>* bv_blocks) const in build_rs_index() argument
2352 if (bv_blocks) in build_rs_index()
2354 bv_blocks->clear(); in build_rs_index()
2355 bv_blocks->init(); in build_rs_index()
2398 if (bv_blocks) in build_rs_index()
2402 bv_blocks->set_range_no_check(nb_from, nb_to); in build_rs_index()
2419 if (bv_blocks && cnt) in build_rs_index()
2421 bv_blocks->set(i * bm::set_sub_array_size + j); in build_rs_index()
3539 bv_blocks.init(); in fill_alloc_digest()
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H A Dbmserial.h2854 bool nb_indexed = sim_model_->bv_blocks.test(i); in serialize()
2859 size_type rank = sim_model_->bv_blocks.count_range(0, i); in serialize()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/util/bitset/stress_test/
H A Dstress32.cpp11620 bool eq = sim1.bv_blocks.equal(sim2.bv_blocks); in Check_SimModel()
19964 r_vect.build_nb_digest_and_xor_matrix(sim_model.matr, sim_model.bv_blocks); in TestSparseVector()
21719 assert(sim_model.bv_blocks.test(0)); in TestSparseVector_XOR_Scanner()