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Searched refs:cAtomInfoPlanar (Results 1 – 8 of 8) sorted by relevance

/dports/science/py-pymol/pymol-open-source-2.4.0/layer2/
H A DMmodTyping.cpp82 case cAtomInfoPlanar: return 2; // C2 Carbon - sp2 in getMacroModelAtomType()
91 case cAtomInfoPlanar: return 15; // O2 Oxygen - double bond in getMacroModelAtomType()
99 case cAtomInfoPlanar: in getMacroModelAtomType()
117 case cAtomInfoPlanar: return 101; // S2 Sulfur - sp2 in getMacroModelAtomType()
130 case cAtomInfoPlanar: return 54; // B2 Boron - sp2 in getMacroModelAtomType()
H A DMol2Typing.cpp129 case cAtomInfoPlanar: in getMOL2Type()
144 case cAtomInfoPlanar: in getMOL2Type()
162 case cAtomInfoPlanar: return "O.2"; in getMOL2Type()
173 case cAtomInfoPlanar: return "S.2"; in getMOL2Type()
H A DAtomInfo.cpp1458 case cAtomInfoPlanar: in AtomInfoGetBondLength()
1529 case cAtomInfoPlanar: /* planer carbon ============= */ in AtomInfoGetBondLength()
1565 case cAtomInfoPlanar: in AtomInfoGetBondLength()
1662 if((a1->geom == cAtomInfoPlanar) && (a2->geom == cAtomInfoPlanar)) in AtomInfoGetBondLength()
1698 if((a1->geom == cAtomInfoPlanar) && (a2->geom == cAtomInfoPlanar)) in AtomInfoGetBondLength()
1709 } else if(a1->geom == cAtomInfoPlanar) { in AtomInfoGetBondLength()
1758 case cAtomInfoPlanar: in AtomInfoGetBondLength()
1769 case cAtomInfoPlanar: in AtomInfoGetBondLength()
H A DHydrogenAdder.cpp63 if (I->AtomInfo[atm].geom != cAtomInfoPlanar) in get_planer_normal_cs()
212 case cAtomInfoPlanar: in ObjectMoleculeSetMissingNeighborCoords()
H A DObjectMolecule.cpp3689 case cAtomInfoPlanar: in get_planer_normal()
3792 case cAtomInfoPlanar: in ObjectMoleculeFindOpenValenceVector()
3842 case cAtomInfoPlanar: in ObjectMoleculeFindOpenValenceVector()
4736 result = cAtomInfoPlanar; in ObjectMoleculeGetAtomGeometry()
5691 if(ai->geom == cAtomInfoPlanar) in ObjectMoleculeInferChemForProtein()
5822 carbonVal[cAtomInfoPlanar] = 3; in ObjectMoleculeInferChemFromNeighGeom()
5884 if(geom == cAtomInfoPlanar) { in ObjectMoleculeInferChemFromNeighGeom()
5886 ai->geom = cAtomInfoPlanar; in ObjectMoleculeInferChemFromNeighGeom()
6177 ai0->geom = cAtomInfoPlanar; in ObjectMoleculeInferChemFromBonds()
6178 ai1->geom = cAtomInfoPlanar; in ObjectMoleculeInferChemFromBonds()
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H A DAtomInfo.h121 #define cAtomInfoPlanar 3 macro
H A DSculpt.cpp442 planar[a] = (ai->geom == cAtomInfoPlanar); in SculptMeasureObject()
H A DObjectMolecule2.cpp198 if(ai->geom == cAtomInfoPlanar) { in populate_other()