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Searched refs:cdbz (Results 1 – 7 of 7) sorted by relevance

/dports/biology/cdbfasta/cdbfasta/
H A Dcdbyank.cpp87 GCdbz* cdbz=NULL; variable
166 cdbz->decompress(fout, reclen, fpos); in fetch_record()
417 GCdbz* cdbz=openCdbz(p); in main()
418 if (cdbz==NULL) in main()
420 FILE* zf=cdbz->getZFile(); in main()
423 while ((xcode=cdbz->decompress(fout))>0) numrecs++; in main()
424 delete cdbz; in main()
524 cdbz=openCdbz(dbname); in main()
525 if (cdbz==NULL) in main()
527 fz=cdbz->getZFile(); in main()
[all …]
H A Dcdbfasta.cpp651 GCdbz cdbz(zf); // zlib interface in main() local
652 recpos=cdbz.getZRecPos(); in main()
653 while ((key=cdbz.compress(readbuf,record_marker))!=NULL) { in main()
654 recsize=cdbz.getZRecSize(); in main()
662 recpos = cdbz.getZRecPos(); in main()
665 cdbz.compress_end(); in main()
H A DREADME189 cat my_data_files* | cdbfasta - -z mydata.cdbz
/dports/biology/gffread/gffread-0.12.7/gclib/
H A DGCdbYank.cpp303 cdbz=NULL; in GCdbYank()
368 cdbz=openCdbz(dbname); in GCdbYank()
369 if (cdbz==NULL) in GCdbYank()
371 fz=cdbz->getZFile(); in GCdbYank()
393 delete cdbz; in ~GCdbYank()
438 return cdbz->decompress(rec, reclen, fpos, seqCallBack); in getRecord()
H A DGCdbYank.h54 GCdbZFasta* cdbz; variable
/dports/science/cp2k/cp2k-2e995eec7fd208c8a72d9544807bd8b8ba8cd1cc/src/aobasis/
H A Dai_oneelectron.F108 INTEGER :: ax, ay, az, bx, by, bz, cda, cdax, cday, cdaz, cdb, cdbx, cdby, cdbz, coa, coamx, & local
482 cdbz = coset(dbx, dby, dbz + 1)
503 … fs(coa, cob, cdbz) = ftz*s(coa, cobpz, cdb) - fbz*s(coa, cobmz, cdb)
/dports/science/cp2k-data/cp2k-7.1.0/src/aobasis/
H A Dai_oneelectron.F108 INTEGER :: ax, ay, az, bx, by, bz, cda, cdax, cday, cdaz, cdb, cdbx, cdby, cdbz, coa, coamx, & local
482 cdbz = coset(dbx, dby, dbz + 1)
503 … fs(coa, cob, cdbz) = ftz*s(coa, cobpz, cdb) - fbz*s(coa, cobmz, cdb)