Searched refs:cdsstart (Results 1 – 3 of 3) sorted by relevance
/dports/biology/emboss/EMBOSS-6.6.0/ajax/ensembl/ |
H A D | ensqcsequence.c | 281 ajuint cdsstart, in ensQcsequenceNewIni() argument 317 qcs->CdsStart = cdsstart; in ensQcsequenceNewIni() 880 AjBool ensQcsequenceSetCdsStart(EnsPQcsequence qcs, ajuint cdsstart) in ensQcsequenceSetCdsStart() argument 885 qcs->CdsStart = cdsstart; in ensQcsequenceSetCdsStart() 1855 ajuint cdsstart = 0U; in qcsequenceadaptorFetchAllbyStatement() local 1917 cdsstart = 0; in qcsequenceadaptorFetchAllbyStatement() 1932 ajSqlcolumnToUint(sqlr, &cdsstart); in qcsequenceadaptorFetchAllbyStatement() 1950 cdsstart, in qcsequenceadaptorFetchAllbyStatement()
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H A D | ensqcsequence.h | 150 ajuint cdsstart, 202 AjBool ensQcsequenceSetCdsStart(EnsPQcsequence qcs, ajuint cdsstart);
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H A D | enstranscript.c | 5572 ajuint cdsstart = 0U; in ensTranscriptFetchSequenceCodingStr() local 5604 cdsstart = ensTranscriptCalculateTranscriptCodingStart(transcript, in ensTranscriptFetchSequenceCodingStr() 5607 if (!cdsstart) in ensTranscriptFetchSequenceCodingStr() 5610 "Translation pair with an invalid cdsstart %u.\n", cdsstart); in ensTranscriptFetchSequenceCodingStr() 5633 ajStrAppendSubS(Psequence, sequence, cdsstart - 1, cdsend - 1); in ensTranscriptFetchSequenceCodingStr() 6514 ajuint cdsstart = 0U; in ensTranscriptMapperSliceTocoding() local 6589 cdsstart = ensMapperresultGetCoordinateStart(gcmr) in ensTranscriptMapperSliceTocoding() 6608 cdsstart = 1; in ensTranscriptMapperSliceTocoding() 6634 cdsstart, in ensTranscriptMapperSliceTocoding()
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