/dports/science/apbs/apbs-pdb2pqr-apbs-1.5-102-g500c1473/pdb2pqr/propka30/Source/ |
H A D | pdb.py | 72 if newatom.chainID in atoms: 94 chainID = getChainID(line) 96 if chainID not in atoms: 434 chainID = None, argument 449 if chainID != None: self.chainID = chainID 464 chainID = None, argument 479 if chainID == None: chainID = self.chainID 494 chainID=chainID, 508 chainID = None, argument 523 if chainID == None: chainID = self.chainID [all …]
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/dports/science/apbs/apbs-pdb2pqr-apbs-1.5-102-g500c1473/pdb2pqr/pdb2pka/ |
H A D | pKa_utility_functions_compat.py | 30 chainID='' 63 chainID=last_split[0] 65 chainID='' 81 chainID='' 83 chainID=cid 85 chainID='' 114 chainID=split_lastsplit[0] 116 chainID='' 211 chainID='' 213 chainID=residue[7] [all …]
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/dports/databases/mariadb105-client/mariadb-10.5.15/extra/wolfssl/wolfssl/certs/test-pathlen/ |
H A D | assemble-chains.sh | 22 chainID="$1" 32 echo "Updating $chainID-$icaNum-$pathLen.pem" 41 openssl x509 -in "$chainID-$icaNum-$pathLen.pem" -text > ca_tmp.pem 43 mv ca_tmp.pem "$chainID-$icaNum-$pathLen.pem" 45 echo "Updating $chainID-$icaNum-pathlen$pathLen.pem" 54 openssl x509 -in "$chainID-$icaNum-pathlen$pathLen.pem" -text > ca_tmp.pem 56 mv ca_tmp.pem "$chainID-$icaNum-pathlen$pathLen.pem" 72 chainID="$1" 75 echo "Updating $chainID-entity.pem" 85 openssl x509 -in "$chainID"-entity.pem -text > cert_tmp.pem [all …]
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/dports/databases/mariadb104-server/mariadb-10.4.24/extra/wolfssl/wolfssl/certs/test-pathlen/ |
H A D | assemble-chains.sh | 22 chainID="$1" 32 echo "Updating $chainID-$icaNum-$pathLen.pem" 41 openssl x509 -in "$chainID-$icaNum-$pathLen.pem" -text > ca_tmp.pem 43 mv ca_tmp.pem "$chainID-$icaNum-$pathLen.pem" 45 echo "Updating $chainID-$icaNum-pathlen$pathLen.pem" 54 openssl x509 -in "$chainID-$icaNum-pathlen$pathLen.pem" -text > ca_tmp.pem 56 mv ca_tmp.pem "$chainID-$icaNum-pathlen$pathLen.pem" 72 chainID="$1" 75 echo "Updating $chainID-entity.pem" 85 openssl x509 -in "$chainID"-entity.pem -text > cert_tmp.pem [all …]
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/dports/databases/mariadb105-server/mariadb-10.5.15/extra/wolfssl/wolfssl/certs/test-pathlen/ |
H A D | assemble-chains.sh | 22 chainID="$1" 32 echo "Updating $chainID-$icaNum-$pathLen.pem" 41 openssl x509 -in "$chainID-$icaNum-$pathLen.pem" -text > ca_tmp.pem 43 mv ca_tmp.pem "$chainID-$icaNum-$pathLen.pem" 45 echo "Updating $chainID-$icaNum-pathlen$pathLen.pem" 54 openssl x509 -in "$chainID-$icaNum-pathlen$pathLen.pem" -text > ca_tmp.pem 56 mv ca_tmp.pem "$chainID-$icaNum-pathlen$pathLen.pem" 72 chainID="$1" 75 echo "Updating $chainID-entity.pem" 85 openssl x509 -in "$chainID"-entity.pem -text > cert_tmp.pem [all …]
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/dports/databases/mariadb104-client/mariadb-10.4.24/extra/wolfssl/wolfssl/certs/test-pathlen/ |
H A D | assemble-chains.sh | 22 chainID="$1" 32 echo "Updating $chainID-$icaNum-$pathLen.pem" 41 openssl x509 -in "$chainID-$icaNum-$pathLen.pem" -text > ca_tmp.pem 43 mv ca_tmp.pem "$chainID-$icaNum-$pathLen.pem" 45 echo "Updating $chainID-$icaNum-pathlen$pathLen.pem" 54 openssl x509 -in "$chainID-$icaNum-pathlen$pathLen.pem" -text > ca_tmp.pem 56 mv ca_tmp.pem "$chainID-$icaNum-pathlen$pathLen.pem" 72 chainID="$1" 75 echo "Updating $chainID-entity.pem" 85 openssl x509 -in "$chainID"-entity.pem -text > cert_tmp.pem [all …]
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/dports/science/apbs/apbs-pdb2pqr-apbs-1.5-102-g500c1473/pdb2pqr/src/ |
H A D | protein.py | 96 record.chainID = string.ascii_uppercase[count] 98 chainID = record.chainID 106 if chainID not in chainDict: 107 myChain = Chain(chainID) 108 chainDict[chainID] = myChain 112 chainID != previousAtom.chainID: 122 chainDict[previousAtom.chainID].addResidue(myResidue) 138 chainDict[previousAtom.chainID].addResidue(myResidue) 209 currentchainID = atom.chainID 210 elif atom.chainID != currentchainID: [all …]
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/dports/science/jmol/jmol-14.32.7/src/org/jmol/modelset/ |
H A D | Chain.java | 42 public int chainID; field in Chain 63 Chain(Model model, int chainID, int chainNo) { in Chain() argument 65 this.chainID = chainID; in Chain() 75 …return (chainID == 0 ? "" : chainID < 256 ? "" + (char) chainID : (String) model.ms.vwr.getChainID… in getIDStr()
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/dports/science/py-moltemplate/moltemplate-2.19.14/moltemplate/ |
H A D | pdbsort.py | 40 self.chainID = setChainID 55 …return (self.chainID, self.seqNum, self.iCode, self.atomID) <= (other.chainID, other.seqNum, other… 58 …return (self.chainID, self.seqNum, self.iCode, self.atomID) < (other.chainID, other.seqNum, other.… 63 …return (self.chainID, self.seqNum, self.iCode, self.atomID) == (other.chainID, other.seqNum, other… 87 i += ord(self.chainID) 125 chainID = line[21:22] 128 atomdescr = AtomDescr(chainID, int(seqNumStr), iCode, int(atomID))
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/dports/sysutils/istio/istio-1.6.7/vendor/github.com/docker/docker/vendor/github.com/containerd/containerd/rootfs/ |
H A D | apply.go | 55 chainID := identity.ChainID(chain) 60 _, err := sn.Stat(ctx, chainID.String()) 63 return "", errors.Wrapf(err, "failed to stat snapshot %s", chainID) 71 return chainID, nil 79 chainID = identity.ChainID(append(chain, layer.Diff.Digest)).String() 82 if _, err := sn.Stat(ctx, chainID); err != nil { 84 return false, errors.Wrapf(err, "failed to stat snapshot %s", chainID) 101 chainID = identity.ChainID(chain) 110 key = fmt.Sprintf("extract-%s %s", uniquePart(), chainID) 157 if err = sn.Commit(ctx, chainID.String(), key, opts...); err != nil {
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/dports/sysutils/docker/docker-ce-18.09.5/components/engine/vendor/github.com/containerd/containerd/rootfs/ |
H A D | apply.go | 55 chainID := identity.ChainID(chain) 60 _, err := sn.Stat(ctx, chainID.String()) 63 return "", errors.Wrapf(err, "failed to stat snapshot %s", chainID) 71 return chainID, nil 79 chainID = identity.ChainID(append(chain, layer.Diff.Digest)).String() 82 if _, err := sn.Stat(ctx, chainID); err != nil { 84 return false, errors.Wrapf(err, "failed to stat snapshot %s", chainID) 101 chainID = identity.ChainID(chain) 110 key = fmt.Sprintf("extract-%s %s", uniquePart(), chainID) 157 if err = sn.Commit(ctx, chainID.String(), key, opts...); err != nil {
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/dports/databases/cayley/cayley-0.7.5-2-gcf576ba/vendor/github.com/docker/docker/vendor/github.com/containerd/containerd/rootfs/ |
H A D | apply.go | 55 chainID := identity.ChainID(chain) 60 _, err := sn.Stat(ctx, chainID.String()) 63 return "", errors.Wrapf(err, "failed to stat snapshot %s", chainID) 71 return chainID, nil 79 chainID = identity.ChainID(append(chain, layer.Diff.Digest)).String() 82 if _, err := sn.Stat(ctx, chainID); err != nil { 84 return false, errors.Wrapf(err, "failed to stat snapshot %s", chainID) 101 chainID = identity.ChainID(chain) 110 key = fmt.Sprintf("extract-%s %s", uniquePart(), chainID) 157 if err = sn.Commit(ctx, chainID.String(), key, opts...); err != nil {
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/dports/databases/timescaledb-backup/timescaledb-backup-0.1.1/vendor/github.com/docker/docker/vendor/github.com/containerd/containerd/rootfs/ |
H A D | apply.go | 55 chainID := identity.ChainID(chain) 60 _, err := sn.Stat(ctx, chainID.String()) 63 return "", errors.Wrapf(err, "failed to stat snapshot %s", chainID) 71 return chainID, nil 79 chainID = identity.ChainID(append(chain, layer.Diff.Digest)).String() 82 if _, err := sn.Stat(ctx, chainID); err != nil { 84 return false, errors.Wrapf(err, "failed to stat snapshot %s", chainID) 101 chainID = identity.ChainID(chain) 110 key = fmt.Sprintf("extract-%s %s", uniquePart(), chainID) 157 if err = sn.Commit(ctx, chainID.String(), key, opts...); err != nil {
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/dports/net-p2p/go-ethereum/go-ethereum-1.10.14/vendor/github.com/docker/docker/vendor/github.com/containerd/containerd/rootfs/ |
H A D | apply.go | 55 chainID := identity.ChainID(chain) 60 _, err := sn.Stat(ctx, chainID.String()) 63 return "", errors.Wrapf(err, "failed to stat snapshot %s", chainID) 71 return chainID, nil 79 chainID = identity.ChainID(append(chain, layer.Diff.Digest)).String() 82 if _, err := sn.Stat(ctx, chainID); err != nil { 84 return false, errors.Wrapf(err, "failed to stat snapshot %s", chainID) 101 chainID = identity.ChainID(chain) 110 key = fmt.Sprintf("extract-%s %s", uniquePart(), chainID) 157 if err = sn.Commit(ctx, chainID.String(), key, opts...); err != nil {
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/dports/sysutils/docker/docker-ce-18.09.5/components/cli/vendor/github.com/containerd/containerd/rootfs/ |
H A D | apply.go | 55 chainID := identity.ChainID(chain) 60 _, err := sn.Stat(ctx, chainID.String()) 63 return "", errors.Wrapf(err, "failed to stat snapshot %s", chainID) 71 return chainID, nil 79 chainID = identity.ChainID(append(chain, layer.Diff.Digest)).String() 82 if _, err := sn.Stat(ctx, chainID); err != nil { 84 return false, errors.Wrapf(err, "failed to stat snapshot %s", chainID) 101 chainID = identity.ChainID(chain) 110 key = fmt.Sprintf("extract-%s %s", uniquePart(), chainID) 157 if err = sn.Commit(ctx, chainID.String(), key, opts...); err != nil {
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/dports/science/mmdb2/mmdb2-2.0.20/mmdb2/ |
H A D | mmdb_chain.cpp | 102 if (!strcmp(PContainerChain(Container[i])->chainID,chainID)) { in MoveByChainID() 117 chainID[0] = char(0); in MakeStreamFunctions() 181 if (chain->chainID[0]) S[12] = chain->chainID[0]; in PDBASCIIDump() 452 if (chain->chainID[0]) S[16] = chain->chainID[0]; in PDBASCIIDump() 649 if (chain) strcpy ( chainID,chain->chainID ); in SetChain() 817 if (chainID[0]==char(1)) strcpy ( chainID,chID ); in GetCIF() 938 if (chain->chainID[0]) S[16] = chain->chainID[0]; in PDBASCIIDump() 1148 if (chain->chainID[0]) S[12] = chain->chainID[0]; in PDBASCIIDump() 2123 strcpy ( chainID ,chain->chainID ); in CopyAnnotations() 2140 strcpy ( chainID ,chain->chainID ); in _copy() [all …]
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/dports/biology/garlic/garlic-1.6/ |
H A D | list_exposed_polar.c | 66 char chainID; in ListExposedPolarResidues_() local 123 chainID = curr_atomSP->raw_atomS.chainID; in ListExposedPolarResidues_() 141 if (curr_exposedSP->chainID != chainID) continue; in ListExposedPolarResidues_() 167 curr_exposedSP->chainID = chainID; in ListExposedPolarResidues_()
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/dports/devel/gitlab-runner/gitlab-runner-8925d9a06fd8e452e2161a768462652a2a13111f/vendor/github.com/containerd/containerd/containerd-1.4.3/rootfs/ |
H A D | apply.go | 63 chainID := identity.ChainID(chain) 68 _, err := sn.Stat(ctx, chainID.String()) 71 return "", errors.Wrapf(err, "failed to stat snapshot %s", chainID) 79 return chainID, nil 94 chainID = identity.ChainID(append(chain, layer.Diff.Digest)).String() 97 if _, err := sn.Stat(ctx, chainID); err != nil { 99 return false, errors.Wrapf(err, "failed to stat snapshot %s", chainID) 117 chainID = identity.ChainID(chain) 126 key = fmt.Sprintf("extract-%s %s", uniquePart(), chainID) 173 if err = sn.Commit(ctx, chainID.String(), key, opts...); err != nil {
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/dports/sysutils/istio/istio-1.6.7/vendor/github.com/containerd/containerd/rootfs/ |
H A D | apply.go | 63 chainID := identity.ChainID(chain) 68 _, err := sn.Stat(ctx, chainID.String()) 71 return "", errors.Wrapf(err, "failed to stat snapshot %s", chainID) 79 return chainID, nil 94 chainID = identity.ChainID(append(chain, layer.Diff.Digest)).String() 97 if _, err := sn.Stat(ctx, chainID); err != nil { 99 return false, errors.Wrapf(err, "failed to stat snapshot %s", chainID) 117 chainID = identity.ChainID(chain) 126 key = fmt.Sprintf("extract-%s %s", uniquePart(), chainID) 173 if err = sn.Commit(ctx, chainID.String(), key, opts...); err != nil {
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/dports/net-im/dendrite/dendrite-0.5.1/vendor/github.com/docker/docker/vendor/github.com/containerd/containerd/rootfs/ |
H A D | apply.go | 63 chainID := identity.ChainID(chain) 68 _, err := sn.Stat(ctx, chainID.String()) 71 return "", errors.Wrapf(err, "failed to stat snapshot %s", chainID) 79 return chainID, nil 94 chainID = identity.ChainID(append(chain, layer.Diff.Digest)).String() 97 if _, err := sn.Stat(ctx, chainID); err != nil { 99 return false, errors.Wrapf(err, "failed to stat snapshot %s", chainID) 117 chainID = identity.ChainID(chain) 126 key = fmt.Sprintf("extract-%s %s", uniquePart(), chainID) 173 if err = sn.Commit(ctx, chainID.String(), key, opts...); err != nil {
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/dports/net-im/dendrite/dendrite-0.5.1/vendor/github.com/containerd/containerd/rootfs/ |
H A D | apply.go | 63 chainID := identity.ChainID(chain) 68 _, err := sn.Stat(ctx, chainID.String()) 71 return "", errors.Wrapf(err, "failed to stat snapshot %s", chainID) 79 return chainID, nil 94 chainID = identity.ChainID(append(chain, layer.Diff.Digest)).String() 97 if _, err := sn.Stat(ctx, chainID); err != nil { 99 return false, errors.Wrapf(err, "failed to stat snapshot %s", chainID) 117 chainID = identity.ChainID(chain) 126 key = fmt.Sprintf(snapshots.UnpackKeyFormat, uniquePart(), chainID) 173 if err = sn.Commit(ctx, chainID.String(), key, opts...); err != nil {
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/dports/net/concourse-fly/concourse-6.7.1/vendor/github.com/containerd/containerd/rootfs/ |
H A D | apply.go | 63 chainID := identity.ChainID(chain) 68 _, err := sn.Stat(ctx, chainID.String()) 71 return "", errors.Wrapf(err, "failed to stat snapshot %s", chainID) 79 return chainID, nil 94 chainID = identity.ChainID(append(chain, layer.Diff.Digest)).String() 97 if _, err := sn.Stat(ctx, chainID); err != nil { 99 return false, errors.Wrapf(err, "failed to stat snapshot %s", chainID) 117 chainID = identity.ChainID(chain) 126 key = fmt.Sprintf("extract-%s %s", uniquePart(), chainID) 173 if err = sn.Commit(ctx, chainID.String(), key, opts...); err != nil {
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/dports/net-mgmt/promscale/promscale-0.6.2/vendor/github.com/docker/docker/vendor/github.com/containerd/containerd/rootfs/ |
H A D | apply.go | 63 chainID := identity.ChainID(chain) 68 _, err := sn.Stat(ctx, chainID.String()) 71 return "", errors.Wrapf(err, "failed to stat snapshot %s", chainID) 79 return chainID, nil 94 chainID = identity.ChainID(append(chain, layer.Diff.Digest)).String() 97 if _, err := sn.Stat(ctx, chainID); err != nil { 99 return false, errors.Wrapf(err, "failed to stat snapshot %s", chainID) 117 chainID = identity.ChainID(chain) 126 key = fmt.Sprintf("extract-%s %s", uniquePart(), chainID) 173 if err = sn.Commit(ctx, chainID.String(), key, opts...); err != nil {
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/dports/net-mgmt/promscale/promscale-0.6.2/vendor/github.com/containerd/containerd/rootfs/ |
H A D | apply.go | 63 chainID := identity.ChainID(chain) 68 _, err := sn.Stat(ctx, chainID.String()) 71 return "", errors.Wrapf(err, "failed to stat snapshot %s", chainID) 79 return chainID, nil 94 chainID = identity.ChainID(append(chain, layer.Diff.Digest)).String() 97 if _, err := sn.Stat(ctx, chainID); err != nil { 99 return false, errors.Wrapf(err, "failed to stat snapshot %s", chainID) 117 chainID = identity.ChainID(chain) 126 key = fmt.Sprintf(snapshots.UnpackKeyFormat, uniquePart(), chainID) 173 if err = sn.Commit(ctx, chainID.String(), key, opts...); err != nil {
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/dports/net-mgmt/promscale/promscale-0.6.2/vendor/github.com/Microsoft/hcsshim/test/vendor/github.com/containerd/containerd/rootfs/ |
H A D | apply.go | 63 chainID := identity.ChainID(chain) 68 _, err := sn.Stat(ctx, chainID.String()) 71 return "", errors.Wrapf(err, "failed to stat snapshot %s", chainID) 79 return chainID, nil 94 chainID = identity.ChainID(append(chain, layer.Diff.Digest)).String() 97 if _, err := sn.Stat(ctx, chainID); err != nil { 99 return false, errors.Wrapf(err, "failed to stat snapshot %s", chainID) 117 chainID = identity.ChainID(chain) 126 key = fmt.Sprintf(snapshots.UnpackKeyFormat, uniquePart(), chainID) 173 if err = sn.Commit(ctx, chainID.String(), key, opts...); err != nil {
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