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Searched refs:checkpointPathPrefix (Results 1 – 4 of 4) sorted by relevance

/dports/biology/abyss/abyss-2.3.1/BloomDBG/
H A DCheckpoint.h40 assert(!params.checkpointPathPrefix.empty()); in createCheckpoint()
41 std::string prefix = params.checkpointPathPrefix; in createCheckpoint()
134 assert(!params.checkpointPathPrefix.empty()); in checkpointExists()
135 std::string prefix = params.checkpointPathPrefix; in checkpointExists()
168 assert(!params.checkpointPathPrefix.empty()); in resumeFromCheckpoint()
169 std::string prefix = params.checkpointPathPrefix; in resumeFromCheckpoint()
247 assert(!params.checkpointPathPrefix.empty()); in removeCheckpointData()
248 std::string prefix = params.checkpointPathPrefix; in removeCheckpointData()
H A DAssemblyParams.h25 std::string checkpointPathPrefix; member
78 keepCheckpoint(false), checkpointPathPrefix("bloom-dbg-checkpoint"), in AssemblyParams()
H A Dbloom-dbg.cc262 assert(!params.checkpointPathPrefix.empty()); in resumeAssemblyFromCheckpoint()
263 string prefix = params.checkpointPathPrefix; in resumeAssemblyFromCheckpoint()
469 arg >> params.checkpointPathPrefix; in main()
H A Dbloom-dbg.h920 assert(!params.checkpointPathPrefix.empty()); in assemble()
921 std::string path = params.checkpointPathPrefix + CHECKPOINT_FASTA_EXT + CHECKPOINT_TMP_EXT; in assemble()