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Searched refs:colStop (Results 1 – 19 of 19) sorted by relevance

/dports/science/jdftx/jdftx-1.6.0/jdftx/aux/
H A DSphericalChi.cpp70 std::vector<int> colStart, colStop; in compute() local
95 colStop.push_back(colOffset); in compute()
106 { b.data()[b.index(i,0)] = trace(diag_UdagKV_X_VdagKU(colStart[i],colStop[i])); in compute()
107 N.data()[N.index(i,0)] = (1./3) * (colStop[i] - colStart[i]); in compute()
109 { matrix UdagKUsub = UdagKU(colStart[i],colStop[i], colStart[j],colStop[j]); in compute()
120 std::fill(Y.data()+colStart[i], Y.data()+colStop[i], (1./3)*alpha[i]); in compute()
129 grad->at(i) = 2. * trace(R_w(colStart[i],colStop[i])); in compute()
/dports/graphics/engauge-digitizer/engauge-digitizer-12.2.2/src/util/
H A DPixels.cpp82 int colStop = qFloor (col + (1 + qSqrt (thresholdCount))); // Exclusive in fillHole() local
87 for (int colIter = colStart; colIter < colStop; colIter++) { in fillHole()
99 for (int colIter = colStart; colIter < colStop; colIter++) { in fillHole()
/dports/science/jdftx/jdftx-1.6.0/jdftx/electronic/
H A DColumnBundle.cpp101 ColumnBundle ColumnBundle::getSub(int colStart, int colStop) const in getSub()
103 assert(colStop<=nCols()); in getSub()
104 int nColsSub = colStop - colStart; in getSub()
160 void ColumnBundle::randomize(int colStart, int colStop) in randomize() argument
172 for(int i=colStart; i<colStop; i++) in randomize()
H A DColumnBundle.h70 …ColumnBundle getSub(int colStart, int colStop) const; //!< get a range of columns as a ColumnBundl…
77 void randomize(int colStart, int colStop); //!< randomize a selected range of columns
H A DDumpBGW_fluid.cpp239 int colStop = (nBasisMax * (iProcCol+1)) / nProcsCol; in writeChiFluid() local
240 int nColsMine = colStop - colStart; in writeChiFluid()
265 initYlmAndWeights(q[iq], iGarr[iq], colStart, colStop, gInfo.GT, susceptibility, wCol, YlmCol); in writeChiFluid()
H A DColumnBundleOperators.cpp494 int colStop = ((iThread+1) * X->nCols())/nThreads; in diagouterI_sub() local
501 for(int i=colStart; i<colStop; i++) in diagouterI_sub()
506 { for(int i=colStart; i<colStop; i++) in diagouterI_sub()
/dports/biology/bbmap/bbmap/current/align2/
H A DMultiStateAligner10ts.java229 int colStop=maxGoodCol; in fillLimitedX()
240 System.out.println("colStop="+colStop); in fillLimitedX()
244 if(colStart<0 || colStop<colStart){break;} in fillLimitedX()
542 if(col>=colStop){ in fillLimitedX()
543 if(col>colStop && maxGoodCol<col){break;} in fillLimitedX()
715 System.out.println("colStop="+colStop); in fillBanded1()
719 if(colStart<0 || colStop<colStart){break;} in fillBanded1()
1017 if(col>=colStop){ in fillBanded1()
1156 int colStop=maxGoodCol;
1167 System.out.println("colStop="+colStop);
[all …]
H A DMultiStateAligner11ts.java224 final int colStop=(halfband<1 ? maxGoodCol : Tools.min(maxGoodCol, row+halfband*2-1)); in fillLimitedX()
235 System.out.println("colStop="+colStop); in fillLimitedX()
239 if(colStart<0 || colStop<colStart){break;} in fillLimitedX()
539 if(col>=colStop){ in fillLimitedX()
540 if(col>colStop && (maxGoodCol<col || halfband>0)){break;} in fillLimitedX()
H A DMultiStateAligner9XFlat.java220 final int colStop=(halfband<1 ? maxGoodCol : Tools.min(maxGoodCol, row+halfband*2-1)); in fillLimitedX()
231 System.out.println("colStop="+colStop); in fillLimitedX()
235 if(colStart<0 || colStop<colStart){break;} in fillLimitedX()
528 if(col>=colStop){ in fillLimitedX()
529 if(col>colStop && (maxGoodCol<col || halfband>0)){break;} in fillLimitedX()
H A DMultiStateAligner9ts.java212 final int colStop=(halfband<1 ? maxGoodCol : Tools.min(maxGoodCol, row+halfband*2-1)); in fillLimitedX()
223 System.out.println("colStop="+colStop); in fillLimitedX()
227 if(colStart<0 || colStop<colStart){break;} in fillLimitedX()
525 if(col>=colStop){ in fillLimitedX()
526 if(col>colStop && (maxGoodCol<col || halfband>0)){break;} in fillLimitedX()
H A DMultiStateAligner9Flat.java221 final int colStop=(halfband<1 ? maxGoodCol : Tools.min(maxGoodCol, row+halfband*2-1)); in fillLimitedX()
232 System.out.println("colStop="+colStop); in fillLimitedX()
236 if(colStart<0 || colStop<colStart){break;} in fillLimitedX()
534 if(col>=colStop){ in fillLimitedX()
535 if(col>colStop && (maxGoodCol<col || halfband>0)){break;} in fillLimitedX()
H A DMultiStateAligner9PacBio.java221 final int colStop=(halfband<1 ? maxGoodCol : Tools.min(maxGoodCol, row+halfband*2-1)); in fillLimitedX()
232 System.out.println("colStop="+colStop); in fillLimitedX()
236 if(colStart<0 || colStop<colStart){break;} in fillLimitedX()
534 if(col>=colStop){ in fillLimitedX()
535 if(col>colStop && (maxGoodCol<col || halfband>0)){break;} in fillLimitedX()
/dports/biology/bbmap/bbmap/jni/
H A DMultiStateAligner11tsJNI.c442 const jint colStop=(halfband<1 ? maxGoodCol : min(maxGoodCol, row+halfband*2-1)); in fillLimitedX() local
449 if(colStart<0 || colStop<colStart){break;} in fillLimitedX()
660 if(col>=colStop){ in fillLimitedX()
661 if(col>colStop && (maxGoodCol<col || halfband>0)){break;} in fillLimitedX()
/dports/biology/bbmap/bbmap/current/aligner/
H A DMultiStateAligner9PacBioAdapter.java161 int colStop=maxGoodCol; in fillLimitedX()
172 System.out.println("colStop="+colStop); in fillLimitedX()
176 if(colStart<0 || colStop<colStart){break;} in fillLimitedX()
452 if(col>=colStop){ in fillLimitedX()
453 if(col>colStop && maxGoodCol<col){break;} in fillLimitedX()
H A DMultiStateAligner9PacBioAdapter2.java217 int colStop=maxGoodCol; in fillLimitedX()
228 System.out.println("colStop="+colStop); in fillLimitedX()
232 if(colStart<0 || colStop<colStart){break;} in fillLimitedX()
521 if(col>=colStop){ in fillLimitedX()
522 if(col>colStop && maxGoodCol<col){break;} in fillLimitedX()
H A DMultiStateAligner9PacBioAdapter3.java164 int colStop=maxGoodCol; in fillLimitedX()
175 System.out.println("colStop="+colStop); in fillLimitedX()
179 if(colStart<0 || colStop<colStart){break;} in fillLimitedX()
445 if(col>=colStop){ in fillLimitedX()
446 if(col>colStop && maxGoodCol<col){break;} in fillLimitedX()
H A DMultiStateAligner9PacBioAdapter_WithBarriers.java202 int colStop=maxGoodCol; in fillLimitedX()
213 System.out.println("colStop="+colStop); in fillLimitedX()
217 if(colStart<0 || colStop<colStart){break;} in fillLimitedX()
515 if(col>=colStop){ in fillLimitedX()
516 if(col>colStop && maxGoodCol<col){break;} in fillLimitedX()
/dports/science/jdftx/jdftx-1.6.0/jdftx/core/
H A DmatrixOperators.cpp220 void diagDot_thread(int colStart, int colStop, int nRows, const complex* X, const complex* Y, doubl… in diagDot_thread() argument
223 for(int col=colStart; col<colStop; col++) in diagDot_thread()
/dports/www/gohugo/hugo-0.91.2/hugolib/
H A Dshortcode_test.go265 tem.AddTemplate("_internal/shortcodes/column.html", `-col-{{.Inner }}-colStop-`)