Searched refs:contig_end_pos (Results 1 – 1 of 1) sorted by relevance
| /dports/biology/subread/subread-2.0.2-source/src/ |
| H A D | core-indel.c | 3298 …oat * indel_quality, unsigned int * contig_start_pos, unsigned int * contig_end_pos, int * head_re… in full_indel_alignment() argument
3314 (*contig_end_pos) = 0xffffffff; in full_indel_alignment()
3344 …(*contig_end_pos) = next_best_xk2 + 1 - (probe_key-full_rebuilt_window) + full_rebuilt_window_size; in full_indel_alignment()
4076 …t perfect_segment_start_pos[MAX_INDELS_IN_WINDOW], contig_start_pos, contig_end_pos, all_fresh = 0; in finalise_pileup_file_by_voting() local
4085 …s, indels_read_positions, quality_of_indels_aln, &contig_start_pos, &contig_end_pos, &head_removed… in finalise_pileup_file_by_voting()
4150 …locate_gene_position_max(contig_end_pos - tail_removed_bases ,& global_context -> chromosome_table… in finalise_pileup_file_by_voting()
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