| /dports/math/mlpack/mlpack-3.4.2/src/mlpack/methods/decision_tree/ |
| H A D | gini_gain.hpp | 74 arma::vec counts2(countSpace.memptr() + numClasses, numClasses, false, in Evaluate() local
99 counts2[labels[i - 2]] += weight2; in Evaluate()
122 counts2[labels[labels.n_elem - 1]] += weight2; in Evaluate()
134 counts2[labels[labels.n_elem - 2]] += weight2; in Evaluate()
143 counts += counts2 + counts3 + counts4; in Evaluate()
162 counts2[labels[i - 2]]++; in Evaluate()
175 counts2[labels[labels.n_elem - 1]]++; in Evaluate()
180 counts2[labels[labels.n_elem - 2]]++; in Evaluate()
184 counts += counts2 + counts3 + counts4; in Evaluate()
|
| H A D | information_gain.hpp | 75 arma::vec counts2(countSpace.memptr() + numClasses, numClasses, false, in Evaluate() local
97 counts2[labels[i - 2]] += weight2; in Evaluate()
120 counts2[labels[labels.n_elem - 1]] += weight2; in Evaluate()
132 counts2[labels[labels.n_elem - 2]] += weight2; in Evaluate()
141 counts += counts2 + counts3 + counts4; in Evaluate()
161 counts2[labels[i - 2]]++; in Evaluate()
174 counts2[labels[labels.n_elem - 1]]++; in Evaluate()
179 counts2[labels[labels.n_elem - 2]]++; in Evaluate()
183 counts += counts2 + counts3 + counts4; in Evaluate()
|
| /dports/biology/bbmap/bbmap/pytools/lib/ |
| H A D | kmercount_pos.py | 113 counts2 = [0 for x in range(tallyLen)]
116 tallyPositions(record2.seq,counts2,tallyLen)
124 tallyPositions(record2.seq,counts2,tallyLen)
130 counts2_perc = [ 100 * float(x)/total_reads for x in counts2 ]
133 …out.write("%i\t%i\t%0.2f\t%i\t%0.2f\n" % (i+1,counts1[i],counts1_perc[i],counts2[i],counts2_perc[i…
145 if counts1[i] > max_cnt or counts2[i] > max_cnt:
146 max_cnt = counts1[i] if counts1[i] > counts2[i] else counts2[i]
|
| /dports/devel/hs-git-brunch/git-brunch-1.5.1.0/_cabal_deps/HUnit-1.6.2.0/tests/ |
| H A D | HUnitTests.hs | 17 counts2 <- runTestTT (test [
22 if (errors counts2 + failures counts2 == 0)
|
| /dports/lang/elm/compiler-0.19.1/_cabal_deps/HUnit-1.6.0.0/tests/ |
| H A D | HUnitTests.hs | 17 counts2 <- runTestTT (test [
22 if (errors counts2 + failures counts2 == 0)
|
| /dports/www/hs-wai-app-static/wai-app-static-3.1.7.2/_cabal_deps/HUnit-1.6.2.0/tests/ |
| H A D | HUnitTests.hs | 17 counts2 <- runTestTT (test [
22 if (errors counts2 + failures counts2 == 0)
|
| /dports/www/hs-yesod-bin/yesod-bin-1.6.1/_cabal_deps/HUnit-1.6.2.0/tests/ |
| H A D | HUnitTests.hs | 17 counts2 <- runTestTT (test [
22 if (errors counts2 + failures counts2 == 0)
|
| /dports/www/hs-postgrest/postgrest-8.0.0/_cabal_deps/HUnit-1.6.2.0/tests/ |
| H A D | HUnitTests.hs | 17 counts2 <- runTestTT (test [
22 if (errors counts2 + failures counts2 == 0)
|
| /dports/science/opsin/dan2097-opsin-9b25f7546b67/opsin-core/src/main/java/uk/ac/cam/ch/wwmm/opsin/ |
| H A D | SortParses.java | 25 int[] counts2 = OpsinTools.countNumberOfElementsAndNumberOfChildLessElements(el2); in compare() local
27 int childLessElementsInEl2 = counts2[1]; in compare()
36 int elementsInEl2 = counts2[0]; in compare()
|
| /dports/science/InsightToolkit/ITK-5.0.1/Modules/Core/Common/test/ |
| H A D | itkLightObjectTest.cxx | 46 const int counts2 = light->GetReferenceCount(); in itkLightObjectTest() local
47 if( counts2 != counts1+1 ) in itkLightObjectTest()
56 std::cout << "reference count is: " << counts2 << std::endl; in itkLightObjectTest()
|
| /dports/mail/thunderbird/thunderbird-91.8.0/xpcom/tests/gtest/ |
| H A D | TestQueue.cpp | 102 std::array<uint32_t, 32> counts2{0}; in TEST() local
110 PushMovables(queue2, counts2); in TEST()
114 ExpectCounts(counts2, 0); in TEST()
123 ExpectCounts(counts2, 0); in TEST()
128 ExpectCounts(counts2, 1); in TEST()
|
| /dports/www/firefox/firefox-99.0/xpcom/tests/gtest/ |
| H A D | TestQueue.cpp | 102 std::array<uint32_t, 32> counts2{0}; in TEST() local
110 PushMovables(queue2, counts2); in TEST()
114 ExpectCounts(counts2, 0); in TEST()
123 ExpectCounts(counts2, 0); in TEST()
128 ExpectCounts(counts2, 1); in TEST()
|
| /dports/www/firefox-esr/firefox-91.8.0/xpcom/tests/gtest/ |
| H A D | TestQueue.cpp | 102 std::array<uint32_t, 32> counts2{0}; in TEST() local
110 PushMovables(queue2, counts2); in TEST()
114 ExpectCounts(counts2, 0); in TEST()
123 ExpectCounts(counts2, 0); in TEST()
128 ExpectCounts(counts2, 1); in TEST()
|
| /dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/tools/spark/pipelines/metrics/ |
| H A D | QualityScoreDistributionSpark.java | 108 Counts merge(final Counts counts2) { in merge() argument
110 this.qCounts[i] += counts2.qCounts[i]; in merge()
113 this.oqCounts[i] += counts2.oqCounts[i]; in merge()
134 (counts1, counts2) -> counts1.merge(counts2)); in runTool()
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/cobalt/unit_test/ |
| H A D | kmer_unit_test.cpp | 108 CSparseKmerCounts counts, counts2; in BOOST_AUTO_TEST_CASE() local
116 s_CreateKmerCounts(seq2, counts2); in BOOST_AUTO_TEST_CASE()
133 counts2), 0); in BOOST_AUTO_TEST_CASE()
183 s_CreateKmerCounts(seq2, counts2); in BOOST_AUTO_TEST_CASE()
184 BOOST_CHECK_EQUAL(CSparseKmerCounts::CountCommonKmers(counts, counts2), in BOOST_AUTO_TEST_CASE()
|
| /dports/math/apache-commons-math/commons-math3-3.6.1-src/src/test/java/org/apache/commons/math3/stat/inference/ |
| H A D | ChiSquareTestTest.java | 115 long[][] counts2 = {{10, 15}, {30, 40}, {60, 90} }; in testChiSquareIndependence() local
116 …assertEquals( "chi-square test statistic", 0.168965517241, testStatistic.chiSquare(counts2), 1E-9); in testChiSquareIndependence()
117 …sert.assertEquals("chi-square p-value",0.918987499852, testStatistic.chiSquareTest(counts2), 1E-9); in testChiSquareIndependence()
118 Assert.assertTrue("chi-square test accept", !testStatistic.chiSquareTest(counts2, 0.1)); in testChiSquareIndependence()
|
| H A D | TestUtilsTest.java | 119 long[][] counts2 = {{10, 15}, {30, 40}, {60, 90} }; in testChiSquareIndependence() local
120 …ert.assertEquals( "chi-square test statistic", 0.168965517241, TestUtils.chiSquare(counts2), 1E-9); in testChiSquareIndependence()
121 … Assert.assertEquals("chi-square p-value",0.918987499852, TestUtils.chiSquareTest(counts2), 1E-9); in testChiSquareIndependence()
122 Assert.assertTrue("chi-square test accept", !TestUtils.chiSquareTest(counts2, 0.1)); in testChiSquareIndependence()
|
| /dports/devel/R-cran-parallelly/parallelly/tests/ |
| H A D | availableWorkers.R | 229 counts2 <- table(expanded2) globalVar
230 counts2 <- counts2[unique(expanded2)] globalVar
231 print(counts2)
234 sum(counts) == sum(counts2),
235 all(counts == counts2)
|
| /dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/spark/pipelines/metrics/ |
| H A D | QualityScoreDistributionSparkIntegrationTest.java | 61 final Counts counts2 = new Counts(false); in testAccumulators() local
65 counts2.addRead(read2); in testAccumulators()
67 counts.merge(counts2); in testAccumulators()
|
| /dports/dns/blocky/blocky-0.17/vendor/github.com/mroth/weightedrand/ |
| H A D | weightedrand_test.go | 122 counts2 := make(map[int]int)
134 go checker(counts2)
138 verifyFrequencyCounts(t, counts2, choices)
|
| /dports/biology/bbmap/bbmap/current/bloom/ |
| H A D | TestLargeKmer.java | 31 long[] counts2=countK2(fname1, fname2, k, counts, k2); in main() local
36 for(int i=0; i<counts2.length; i++){ in main()
37 System.out.println(i+":\t"+counts2[i]); in main()
|
| H A D | BloomFilterCorrector.java | 34 …, final int[] leftCounts, final int[] rightCounts, LongList kmers, IntList counts, IntList counts2, in errorCorrect() argument
36 return errorCorrect(r, leftCounts, rightCounts, kmers, counts, counts2, bb, bb2, tracker, bs); in errorCorrect()
64 …, final int[] leftCounts, final int[] rightCounts, LongList kmers, IntList counts, IntList counts2, in errorCorrect() argument
325 …final int[] rightCounts, final IntList counts, final IntList counts2, final ErrorTracker tracker, … in reassemble_pass() argument
338 counts2.clear(); in reassemble_pass()
339 counts2.addAll(counts); in reassemble_pass()
340 reassemble_inner(fromLeft, quals, rightCounts, counts2, errorExtension, kmer, kmer2); in reassemble_pass()
343 counts2.clear(); in reassemble_pass()
344 counts2.addAll(counts); in reassemble_pass()
345 counts2.reverse(); in reassemble_pass()
[all …]
|
| /dports/audio/snd/snd-21.2/tools/ |
| H A D | trec.scm | 228 (define (counts2 x)
230 (+ 1 (counts2 (- x 1)))
235 ((= i 1000) (counts2 1000))
236 (counts2 1000)))
|
| /dports/sysutils/vector/vector-0.10.0/src/event/ |
| H A D | metric.rs | 103 counts: counts2, in add()
108 if buckets == buckets2 && counts.len() == counts2.len() { in add()
109 for (i, c) in counts2.iter().enumerate() { in add()
|
| /dports/biology/bbmap/bbmap/current/jasper/ |
| H A D | KmerPosition.java | 127 processRead(r2, kr, counts2, totalEncounter2); in process()
144 outputResults(counts1, totalEncounter1, counts2, totalEncounter2); in process()
246 private LongList counts2=new LongList(); field in KmerPosition
|