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Searched refs:csq_list (Results 1 – 4 of 4) sorted by relevance

/dports/biology/bio-mocha/bcftools-1.14/
H A Dcsq.c2361 free(hap->csq_list); in hap_destroy()
2768 hts_expand0(csq_t,node->ncsq_list,node->mcsq_list,node->csq_list); in hap_add_csq()
2769 csq_t *csq = &node->csq_list[icsq]; in hap_add_csq()
2865 node->csq_list[icsq].type.ref = hap->stack[ibeg].node->rec; in hap_add_csq()
2866 node->csq_list[icsq].type.biotype = tr->type; in hap_add_csq()
2871 kstring_t str = node->csq_list[icsq].type.vstr; in hap_add_csq()
2896 node->csq_list[icsq].type.vstr = str; in hap_add_csq()
2907 csq_t *tmp_csq = &node->csq_list[node->ncsq_list - 1]; in hap_add_csq()
2923 csq_t *tmp_csq = &node->csq_list[node->ncsq_list - 1]; in hap_add_csq()
3145 csq_t *csq = node->csq_list + i; in hap_print_text()
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/dports/biology/bcftools/bcftools-1.14/
H A Dcsq.c2361 free(hap->csq_list); in hap_destroy()
2768 hts_expand0(csq_t,node->ncsq_list,node->mcsq_list,node->csq_list); in hap_add_csq()
2769 csq_t *csq = &node->csq_list[icsq]; in hap_add_csq()
2865 node->csq_list[icsq].type.ref = hap->stack[ibeg].node->rec; in hap_add_csq()
2866 node->csq_list[icsq].type.biotype = tr->type; in hap_add_csq()
2871 kstring_t str = node->csq_list[icsq].type.vstr; in hap_add_csq()
2896 node->csq_list[icsq].type.vstr = str; in hap_add_csq()
2907 csq_t *tmp_csq = &node->csq_list[node->ncsq_list - 1]; in hap_add_csq()
2923 csq_t *tmp_csq = &node->csq_list[node->ncsq_list - 1]; in hap_add_csq()
3145 csq_t *csq = node->csq_list + i; in hap_print_text()
[all …]
/dports/biology/py-pysam/pysam-0.18.0/bcftools/
H A Dcsq.c2361 free(hap->csq_list); in hap_destroy()
2768 hts_expand0(csq_t,node->ncsq_list,node->mcsq_list,node->csq_list); in hap_add_csq()
2769 csq_t *csq = &node->csq_list[icsq]; in hap_add_csq()
2865 node->csq_list[icsq].type.ref = hap->stack[ibeg].node->rec; in hap_add_csq()
2866 node->csq_list[icsq].type.biotype = tr->type; in hap_add_csq()
2871 kstring_t str = node->csq_list[icsq].type.vstr; in hap_add_csq()
2896 node->csq_list[icsq].type.vstr = str; in hap_add_csq()
2907 csq_t *tmp_csq = &node->csq_list[node->ncsq_list - 1]; in hap_add_csq()
2923 csq_t *tmp_csq = &node->csq_list[node->ncsq_list - 1]; in hap_add_csq()
3145 csq_t *csq = node->csq_list + i; in hap_print_text()
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H A Dcsq.c.pysam.c2363 free(hap->csq_list); in hap_destroy()
2770 hts_expand0(csq_t,node->ncsq_list,node->mcsq_list,node->csq_list); in hap_add_csq()
2771 csq_t *csq = &node->csq_list[icsq]; in hap_add_csq()
2867 node->csq_list[icsq].type.ref = hap->stack[ibeg].node->rec; in hap_add_csq()
2868 node->csq_list[icsq].type.biotype = tr->type; in hap_add_csq()
2873 kstring_t str = node->csq_list[icsq].type.vstr; in hap_add_csq()
2898 node->csq_list[icsq].type.vstr = str; in hap_add_csq()
2909 csq_t *tmp_csq = &node->csq_list[node->ncsq_list - 1]; in hap_add_csq()
2925 csq_t *tmp_csq = &node->csq_list[node->ncsq_list - 1]; in hap_add_csq()
3147 csq_t *csq = node->csq_list + i; in hap_print_text()
[all …]