Searched refs:cur_qual (Results 1 – 5 of 5) sorted by relevance
1646 if (cur_qual == "focus") in SourceFeatRemoveDups()1723 if (cur_qual == "focus") in SourceFeatDerive()1962 if (cur_qual == "note") in CheckQualsInSourceFeat()1970 if (cur_qual != *b) in CheckQualsInSourceFeat()1981 cur_qual.c_str(), p); in CheckQualsInSourceFeat()1988 if (**b != '\0' && cur_qual == *b) in CheckQualsInSourceFeat()1995 if (cur_qual == "organism" || in CheckQualsInSourceFeat()2004 if (cur_qual == SourceOrgMods[i].name) in CheckQualsInSourceFeat()2211 if (cur_qual == "db_xref") in UpdateRawBioSource()2222 if (cur_qual == "organelle") in UpdateRawBioSource()[all …]
3673 (cur_qual == NULL) ? "???" : cur_qual, in fta_remove_dup_quals()3796 if (cur_qual.empty() || cur_val.empty()) in CollectGapFeats()3799 if (cur_qual == "estimated_length") in CollectGapFeats()3812 else if (cur_qual == "gap_type") in CollectGapFeats()3814 else if (cur_qual == "linkage_evidence") in CollectGapFeats()4233 if (cur_qual != "note" || cur_val.empty()) in MergeNoteQual()4279 if (cur_qual != "note") in MergeNoteQual()4650 std::string cur_qual; in ParseQualifiers() local4654 qual = cur_qual; in ParseQualifiers()4956 if (cur_qual == "gap_type" || in ParseFeatureBlock()[all …]
165 static char* CpTheQualValueNext(TQualVector::iterator& cur_qual, const TQualVector::iterator& end_q… in CpTheQualValueNext() argument170 for (; cur_qual != end_qual; ++cur_qual) { in CpTheQualValueNext()171 if (!(*cur_qual)->IsSetQual() || (*cur_qual)->GetQual() != qual || !(*cur_qual)->IsSetVal()) in CpTheQualValueNext()174 qvalue = NStr::Sanitize((*cur_qual)->GetVal()); in CpTheQualValueNext()176 ++cur_qual; in CpTheQualValueNext()1197 TQualVector::iterator cur_qual = feat.SetQual().begin(), in GetCdRegionCB() local1201 while ((qval = CpTheQualValueNext(cur_qual, end_qual, "transl_except")) != NULL) { in GetCdRegionCB()
1504 float cur_qual; in LoadPvar() local1505 if (unlikely(ScanFloat(qual_token, &cur_qual))) { in LoadPvar()1509 if ((load_qual_col & 1) && (cur_qual < var_min_qual)) { in LoadPvar()1516 cur_quals[variant_idx_lowbits] = cur_qual; in LoadPvar()
4140 const int8_t cur_qual = trailing_start[uii]; in BcfParseGqDpMain() local4141 if (((qual_min_i8 > cur_qual) || (qual_max_i8 < cur_qual)) && (cur_qual != -128)) { in BcfParseGqDpMain()4160 const int8_t cur_qual = qual_iter[sample_idx_lowbits]; in BcfParseGqDpMain()4161 if (((qual_min_i8 > cur_qual) || (qual_max_i8 < cur_qual)) && (cur_qual != -128)) { in BcfParseGqDpMain()4244 const int16_t cur_qual = trailing_start[uii]; in BcfParseGqDpMain() local4245 if (((qual_min_i16 > cur_qual) || (qual_max_i16 < cur_qual)) && (cur_qual != -32768)) { in BcfParseGqDpMain()4264 const int16_t cur_qual = qual_iter[sample_idx_lowbits]; in BcfParseGqDpMain()4265 if (((qual_min_i16 > cur_qual) || (qual_max_i16 < cur_qual)) && (cur_qual != -32768)) { in BcfParseGqDpMain()4363 const int32_t cur_qual = trailing_start[uii]; in BcfParseGqDpMain() local4365 … if (((qual_min_i32 > cur_qual) || (qual_max_i32 < cur_qual)) && (cur_qual != (-2147483647 - 1))) { in BcfParseGqDpMain()[all …]