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Searched refs:curr_mtr (Results 1 – 2 of 2) sorted by relevance

/dports/biology/tRNAscan-SE/tRNAscan-SE-2.0/src/
H A Dmodelmaking.c161 switch (curr_mtr->type) { in Transmogrify()
180 for (i2 = curr_mtr->emitl+1; i2 < curr_mtr->nxtl->emitl; i2++) in Transmogrify()
182 curr_tr = AttachTrace(curr_tr, pool, i2, curr_mtr->emitr, curr_mtr->nodeidx, uINSL_ST); in Transmogrify()
186 for (j2 = curr_mtr->emitr-1; j2 > curr_mtr->nxtl->emitr; j2--) in Transmogrify()
197 for (i2 = curr_mtr->emitl+1; i2 < curr_mtr->nxtl->emitl; i2++) in Transmogrify()
207 for (j2 = curr_mtr->emitr-1; j2 > curr_mtr->nxtl->emitr; j2--) in Transmogrify()
221 for (i2 = curr_mtr->emitl; i2 < curr_mtr->nxtl->emitl; i2++) in Transmogrify()
233 for (i2 = curr_mtr->emitl; i2 < curr_mtr->nxtl->emitl; i2++) in Transmogrify()
239 for (j2 = curr_mtr->emitr; j2 > curr_mtr->nxtl->emitr; j2--) in Transmogrify()
253 curr_mtr->nxtr->nodeidx, curr_mtr->nxtr->type)); in Transmogrify()
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H A Dmaxmodelmaker.c861 while ((curr_mtr = PopTracestack(dolist)) != NULL) in trace_maxmx()
863 i = curr_mtr->emitl + 1; /* i,j are 1..alen */ in trace_maxmx()
864 j = curr_mtr->emitr + 1; in trace_maxmx()
868 if (curr_mtr->nxtl == NULL || i > j) in trace_maxmx()
871 switch (curr_mtr->type) { in trace_maxmx()
878 { curr_mtr->nxtl->emitl = nxti; curr_mtr->nxtl->emitr = nxtj; } in trace_maxmx()
887 { curr_mtr->nxtl->emitl = nxti; curr_mtr->nxtl->emitr = nxtj; } in trace_maxmx()
896 { curr_mtr->nxtl->emitl = nxti; curr_mtr->nxtl->emitr = nxtj; } in trace_maxmx()
912 { curr_mtr->nxtl->emitl = nxti; curr_mtr->nxtl->emitr = nxtj; } in trace_maxmx()
921 { curr_mtr->nxtl->emitl = nxti; curr_mtr->nxtl->emitr = nxtj; } in trace_maxmx()
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