Searched refs:current_fusion_cigar (Results 1 – 2 of 2) sorted by relevance
342 char current_fusion_cigar[max_M * 15]; in RSubread_parse_CIGAR_Extra_string() local343 current_fusion_cigar [0] =0; in RSubread_parse_CIGAR_Extra_string()363 …if(current_fusion_cigar[0] && current_fusion_char[0] && current_fusion_pos && current_fusion_stran… in RSubread_parse_CIGAR_Extra_string()367 left_pos = find_left_end_cigar(current_fusion_pos, current_fusion_cigar); in RSubread_parse_CIGAR_Extra_string()368 …ret += RSubread_parse_CIGAR_string(current_fusion_char, left_pos, current_fusion_cigar, max_M - re… in RSubread_parse_CIGAR_Extra_string()372 current_fusion_cigar [0] =0; in RSubread_parse_CIGAR_Extra_string()384 current_fusion_cigar[tag_inner_cursor++]=nch; in RSubread_parse_CIGAR_Extra_string()385 current_fusion_cigar[tag_inner_cursor]=0; in RSubread_parse_CIGAR_Extra_string()
492 char current_fusion_cigar[global_context -> max_M * 15]; in calc_junctions_from_cigar() local493 current_fusion_cigar [0] =0; in calc_junctions_from_cigar()513 …if(current_fusion_cigar[0] && current_fusion_char[0] && current_fusion_pos && current_fusion_stran… in calc_junctions_from_cigar()521 start_pos = find_left_end_cigar(current_fusion_pos, current_fusion_cigar); in calc_junctions_from_cigar()523 …ret += fetch_boundaries(current_fusion_char, current_fusion_cigar, start_pos, current_fusion_stran… in calc_junctions_from_cigar()543 current_fusion_cigar [0] =0; in calc_junctions_from_cigar()554 current_fusion_cigar[tag_inner_cursor++]=nch; in calc_junctions_from_cigar()555 current_fusion_cigar[tag_inner_cursor]=0; in calc_junctions_from_cigar()