Searched refs:de_brujin_grp_id (Results 1 – 1 of 1) sorted by relevance
2522 int de_brujin_grp_id = 2*(first_base_pos / REASSEMBLY_WINDOW_LENGTH) + window_i; in insert_pileup_read() local2524 if(de_brujin_grp_id<0)continue; in insert_pileup_read()2526 HashTable * current_table = block_context -> de_bruijn_graphs [de_brujin_grp_id]; in insert_pileup_read()2540 int start_offset = (first_base_pos - de_brujin_grp_id * REASSEMBLY_WINDOW_LENGTH/2); in insert_pileup_read()2541 if(start_offset < block_context -> start_offsets [de_brujin_grp_id]) in insert_pileup_read()2543 block_context -> start_offsets [de_brujin_grp_id] = start_offset; in insert_pileup_read()2544 block_context -> start_keys[1+10*de_brujin_grp_id]=0; in insert_pileup_read()2545 block_context -> start_keys[10*de_brujin_grp_id]=next_key_prefix; in insert_pileup_read()2547 else if(start_offset == block_context -> start_offsets [de_brujin_grp_id]) in insert_pileup_read()2550 …for(start_key_id=0; start_key_id<10&&block_context -> start_keys[de_brujin_grp_id * 10 + start_key… in insert_pileup_read()[all …]