| /dports/net/scapy/scapy-2.4.5/scapy/contrib/ |
| H A D | coap.py | 149 self.delta_ext, self.delta = self._populate_extended(self.delta)
180 cur_delta += _get_abs_val(o.delta, o.delta_ext)
182 u = 1 + len(o.opt_val) + len(o.delta_ext) + len(o.len_ext)
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/flatfile/ |
| H A D | add.h | 94 bool g_DoesNotReferencePrimary(const objects::CDelta_ext& delta_ext, const objects::CSeq_id& primar…
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| H A D | add.cpp | 782 bool g_DoesNotReferencePrimary(const CDelta_ext& delta_ext, const CSeq_id& primary, CScope& scope) in g_DoesNotReferencePrimary() argument
793 for (const auto& pDeltaSeq : delta_ext.Get()) { in g_DoesNotReferencePrimary()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/ |
| H A D | gaps_edit.cpp | 429 CDelta_ext& delta_ext = bioseq.SetInst().SetExt().SetDelta(); in ConvertBioseqToDelta() local
433 delta_ext.Set().push_back(delta_seq); in ConvertBioseqToDelta()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/edit/ |
| H A D | gaps_edit.cpp | 429 CDelta_ext& delta_ext = bioseq.SetInst().SetExt().SetDelta(); in ConvertBioseqToDelta() local
433 delta_ext.Set().push_back(delta_seq); in ConvertBioseqToDelta()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/ |
| H A D | fasta.cpp | 1412 CDelta_ext& delta_ext = inst.SetExt().SetDelta(); in AssembleSeq() local
1420 delta_ext.AddAndSplit(chunk, format, chunk.length(), false, !TestFlag(fLeaveAsText)); in AssembleSeq()
1460 delta_ext.Set().push_back(move(gap_ds)); in AssembleSeq()
1466 … delta_ext.AddAndSplit(chunk, format, chunk.length(), false, !TestFlag(fLeaveAsText)); in AssembleSeq()
1469 if (delta_ext.Get().size() == 1) { in AssembleSeq()
1472 inst.SetSeq_data(delta_ext.Set().front() in AssembleSeq()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/readers/ |
| H A D | fasta.cpp | 1412 CDelta_ext& delta_ext = inst.SetExt().SetDelta(); in AssembleSeq() local
1420 delta_ext.AddAndSplit(chunk, format, chunk.length(), false, !TestFlag(fLeaveAsText)); in AssembleSeq()
1460 delta_ext.Set().push_back(move(gap_ds)); in AssembleSeq()
1466 … delta_ext.AddAndSplit(chunk, format, chunk.length(), false, !TestFlag(fLeaveAsText)); in AssembleSeq()
1469 if (delta_ext.Get().size() == 1) { in AssembleSeq()
1472 inst.SetSeq_data(delta_ext.Set().front() in AssembleSeq()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/cleanup/ |
| H A D | newcleanupp.hpp | 293 void DeltaExtBC( CDelta_ext & delta_ext, CSeq_inst &seq_inst );
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| H A D | newcleanupp.cpp | 8428 void CNewCleanup_imp::DeltaExtBC( CDelta_ext & delta_ext, CSeq_inst &seq_inst ) in DeltaExtBC() argument
8432 EDIT_EACH_DELTASEQ_IN_DELTAEXT( delta_seq_iter, delta_ext ) { in DeltaExtBC()
8440 ERASE_DELTASEQ_IN_DELTAEXT( delta_seq_iter, delta_ext ); in DeltaExtBC()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/cleanup/ |
| H A D | newcleanupp.hpp | 293 void DeltaExtBC( CDelta_ext & delta_ext, CSeq_inst &seq_inst );
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| H A D | newcleanupp.cpp | 8367 void CNewCleanup_imp::DeltaExtBC( CDelta_ext & delta_ext, CSeq_inst &seq_inst ) in DeltaExtBC() argument
8371 EDIT_EACH_DELTASEQ_IN_DELTAEXT( delta_seq_iter, delta_ext ) { in DeltaExtBC()
8379 ERASE_DELTASEQ_IN_DELTAEXT( delta_seq_iter, delta_ext ); in DeltaExtBC()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/format/ |
| H A D | gather_items.cpp | 1744 const CDelta_ext::Tdata & delta_ext = ctx.GetHandle().GetInst_Ext().GetDelta().Get(); in x_PrepareAnnotDescStrucComment() local
1745 ITERATE(CDelta_ext::Tdata, ext_iter, delta_ext) { in x_PrepareAnnotDescStrucComment()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/format/ |
| H A D | gather_items.cpp | 1744 const CDelta_ext::Tdata & delta_ext = ctx.GetHandle().GetInst_Ext().GetDelta().Get(); in x_PrepareAnnotDescStrucComment() local
1745 ITERATE(CDelta_ext::Tdata, ext_iter, delta_ext) { in x_PrepareAnnotDescStrucComment()
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| /dports/multimedia/smplayer/smplayer-21.10.0/webserver/ |
| H A D | mongoose.c | 12193 uint16_t delta_ext = 0, length_ext = 0; local
12196 coap_split_opt(opt->number - prev_opt_number, &delta_base, &delta_ext);
12203 ptr = coap_add_opt_info(ptr, delta_ext, opt_delta_len);
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| /dports/comms/rtl-433/rtl_433-21.12/src/ |
| H A D | mongoose.c | 12779 uint16_t delta_ext = 0, length_ext = 0; local
12782 coap_split_opt(opt->number - prev_opt_number, &delta_base, &delta_ext);
12789 ptr = coap_add_opt_info(ptr, delta_ext, opt_delta_len);
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