Searched refs:diagonalScore (Results 1 – 2 of 2) sorted by relevance
131 int threshold, char *diagonalScore) { in addKmerCount() argument144 score += diagonalScore[kmer[pos]]; in addKmerCount()343 int threshold, char * diagonalScore){ in addSequence() argument358 score += diagonalScore[kmer[pos]]; in addSequence()
1038 int diagonalScore = 0; in mergeKmerFilesAndOutput() local1042 …diagonalScore = (diagonalScore == 0 || prevDiagonal!=res.pos) ? res.score : diagonalScore + res.sc… in mergeKmerFilesAndOutput()1043 if(diagonalScore >= bestDiagonalCnt){ in mergeKmerFilesAndOutput()1044 bestDiagonalCnt = diagonalScore; in mergeKmerFilesAndOutput()1095 int diagonalScore=0; in writeKmersToDisk() local1138 … diagonalScore += (diagonalScore == 0 || (lastTargetId == targetId && lastDiagonal == diagonal) ); in writeKmersToDisk()1152 writeBuffer[bufferPos].score = diagonalScore; in writeKmersToDisk()1153 diagonalScore = 0; in writeKmersToDisk()