| /dports/science/minc2/minc-release-2.2.00/ezminc/ |
| H A D | minc_1_simple.h | 245 const size_t dimorder[]={0,4,1,2,3}; in load_non_standard_volume() local
248 if(rw.map_space(dimorder[i])<0|| !rw.ndim(dimorder[i]) ) continue; in load_non_standard_volume()
249 strides[rw.map_space(dimorder[i])]=str; in load_non_standard_volume()
250 str*=rw.ndim(dimorder[i]); in load_non_standard_volume()
269 const size_t dimorder[]={0,4,1,2,3}; in save_non_standard_volume() local
272 if(rw.map_space(dimorder[i])<0 || !rw.ndim(dimorder[i]) ) continue; in save_non_standard_volume()
273 strides[rw.map_space(dimorder[i])]=str; in save_non_standard_volume()
274 str*=rw.ndim(dimorder[i]); in save_non_standard_volume()
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| /dports/science/minc2/minc-release-2.2.00/libsrc2/ |
| H A D | volume.c | 37 char dimorder[MI2_CHAR_LENGTH]; in micreate_volume_image() local
46 dimorder[0] = '\0'; /* Set string to empty */ in micreate_volume_image()
54 strcat(dimorder, volume->dim_handles[i]->name); in micreate_volume_image()
56 strcat(dimorder, ","); in micreate_volume_image()
83 strlen(dimorder), dimorder); in micreate_volume_image()
118 strcat(dimorder, ","); in micreate_volume_image()
132 strlen(dimorder), dimorder); in micreate_volume_image()
147 strlen(dimorder), dimorder); in micreate_volume_image()
1037 char dimorder[MI2_CHAR_LENGTH]; in miopen_volume() local
1086 MI_TYPE_STRING, sizeof(dimorder), dimorder); in miopen_volume()
[all …]
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| /dports/science/InsightToolkit/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libsrc2/ |
| H A D | volume.c | 282 char dimorder[MI2_CHAR_LENGTH]; in micreate_volume_image() local
292 dimorder[0] = '\0'; /* Set string to empty */ in micreate_volume_image()
300 …strncat(dimorder, volume->dim_handles[i]->name, MI2_CHAR_LENGTH - 1 - strlen(dimorder)); /*as a re… in micreate_volume_image()
326 strlen(dimorder), dimorder); in micreate_volume_image()
355 strncat(dimorder, volume->dim_handles[i]->name, MI2_CHAR_LENGTH - 1 - strlen(dimorder)); in micreate_volume_image()
357 strncat(dimorder, ",", MI2_CHAR_LENGTH - 1 - strlen(dimorder)); in micreate_volume_image()
371 strlen(dimorder), dimorder); in micreate_volume_image()
385 strlen(dimorder), dimorder); in micreate_volume_image()
1337 char dimorder[MI2_CHAR_LENGTH]; in miopen_volume() local
1435 MI_TYPE_STRING, sizeof(dimorder), dimorder); in miopen_volume()
[all …]
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| /dports/science/cdo/cdo-2.0.0/libcdi/src/ |
| H A D | cdf_write.c | 656 if ( dimorder[id] == 3 && zid != CDI_UNDEFID ) in cdfDefineDimsAndChunks()
663 else if ( dimorder[id] == 2 && yid != CDI_UNDEFID ) in cdfDefineDimsAndChunks()
672 else if ( dimorder[id] == 1 && xid != CDI_UNDEFID ) in cdfDefineDimsAndChunks()
818 int dimorder[3]; // ZYX and ZXY in cdfDefVar() local
819 vlistInqVarDimorder(vlistID, varID, &dimorder); in cdfDefVar()
822 …if ( ((dimorder[0]>0)+(dimorder[1]>0)+(dimorder[2]>0)) < ((xid!=CDI_UNDEFID)+(yid!=CDI_UNDEFID)+(z… in cdfDefVar()
1411 if ( dimorder[id] == 3 && zid != CDI_UNDEFID ) in cdfDefineStartAndCountSlice()
1417 else if ( dimorder[id] == 2 && yid != CDI_UNDEFID ) in cdfDefineStartAndCountSlice()
1456 int dimorder[3]; in cdf_write_var_slice() local
1457 vlistInqVarDimorder(vlistID, varID, &dimorder); in cdf_write_var_slice()
[all …]
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| H A D | vlist_var.c | 1395 int vlistEncodeXyz(int (*dimorder)[3]) in vlistEncodeXyz()
1397 return (*dimorder)[0]*100 + (*dimorder)[1]*10 + (*dimorder)[2]; in vlistEncodeXyz()
1418 int dimorder[3]; in vlistDefVarXYZ() local
1419 vlistDecodeXyz(xyz, &dimorder); in vlistDefVarXYZ()
1423 switch ( dimorder[id] ) in vlistDefVarXYZ()
1428 … default: dimorder[id] = 0; break; //Ensure that we assign a valid dimension to this position. in vlistDefVarXYZ()
1434 …if ( dimz == 0 ) for ( int id = 0; id < 3; ++id ) if ( dimorder[id] == 0 ) {dimorder[id] = 3; brea… in vlistDefVarXYZ()
1435 …if ( dimy == 0 ) for ( int id = 0; id < 3; ++id ) if ( dimorder[id] == 0 ) {dimorder[id] = 2; brea… in vlistDefVarXYZ()
1436 …if ( dimx == 0 ) for ( int id = 0; id < 3; ++id ) if ( dimorder[id] == 0 ) {dimorder[id] = 1; brea… in vlistDefVarXYZ()
1437 xyz = vlistEncodeXyz(&dimorder); in vlistDefVarXYZ()
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| H A D | cdf_read.c | 469 int dimorder[4] = { 3, 4, 2, 1 }; // order of cube sphere grid in cdfGetSliceSlapDescription() local
474 for (int i = 0; i < 3; ++i) dimorder[i] = tmpdimorder[i]; in cdfGetSliceSlapDescription()
475 dimorder[3] = 4; in cdfGetSliceSlapDescription()
476 …*outSwapXY = ((dimorder[2] == 2 || dimorder[0] == 1) && (dimIds[0] != CDI_UNDEFID) && (dimIds[1] !… in cdfGetSliceSlapDescription()
493 const int curDimId = dimIds[dimorder[id]-1]; in cdfGetSliceSlapDescription()
495 switch (dimorder[id]) in cdfGetSliceSlapDescription()
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| H A D | cdilib.c | 55537 int dimorder[3]; // ZYX and ZXY in cdfDefVar() local
55541 …if ( ((dimorder[0]>0)+(dimorder[1]>0)+(dimorder[2]>0)) < ((xid!=CDI_UNDEFID)+(yid!=CDI_UNDEFID)+(z… in cdfDefVar()
56175 int dimorder[3]; in cdf_write_var_slice() local
56177 …const bool swapxy = (dimorder[2] == 2 || dimorder[0] == 1) && xid != CDI_UNDEFID && yid != CDI_UND… in cdf_write_var_slice()
56659 int dimorder[3]; in cdfGetSliceSlapDescription() local
56680 switch ( dimorder[id] ) in cdfGetSliceSlapDescription()
68182 int vlistEncodeXyz(int (*dimorder)[3]) in vlistEncodeXyz()
68184 return (*dimorder)[0]*100 + (*dimorder)[1]*10 + (*dimorder)[2]; in vlistEncodeXyz()
68205 int dimorder[3]; in vlistDefVarXYZ() local
68206 vlistDecodeXyz(xyz, &dimorder); in vlistDefVarXYZ()
[all …]
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| /dports/science/minc2/minc-release-2.2.00/progs/mincpik/ |
| H A D | mincpik.in | 152 $dim_names, $pipe_args, $dimorder,
247 $dimorder = join(',', $space, @{$ordering{$space}});
249 $dimorder .= ',vector_dimension';
257 '-dimorder', $dimorder,
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| /dports/science/py-nibabel/nibabel-3.2.1/nibabel/ |
| H A D | minc2.py | 74 dimorder = var.attrs['dimorder'].decode()
80 return dimorder.split(',')[:len(var.shape)]
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| /dports/science/minc2/minc-release-2.2.00/libsrc2/test/ |
| H A D | hyper-test-2.c | 96 static char *dimorder[] = {"xspace", "yspace", "zspace"}; in main() local
110 r = miset_apparent_dimension_order_by_name(vol, 3, dimorder); in main()
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| /dports/graphics/py-tifffile/tifffile-2021.8.30/tifffile/ |
| H A D | tifffile.py | 10498 dimorder = []
10516 if x not in dimorder and x not in modulo:
10518 dimorder.append(x)
10524 dimorder.append(ax)
10525 hiaxes = ''.join(dimorder)
10550 for dimorder in (
10559 if hiaxes in dimorder:
10565 for ax in dimorder:
10594 for ax, size in zip(dimorder, dimsizes):
10600 dimsizes[dimorder.index('C')] //= samples
[all …]
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| /dports/science/minc2/minc-release-2.2.00/ |
| H A D | ChangeLog | 699 * Fix dimorder handling
795 * progs/rawtominc/rawtominc.c: Add options -dimorder and -swap_bytes.
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| H A D | NEWS | 276 * Rawtominc has new options -dimorder and -swap_bytes.
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| /dports/science/InsightToolkit/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/ |
| H A D | ChangeLog | 804 * Fix dimorder handling
900 * progs/rawtominc/rawtominc.c: Add options -dimorder and -swap_bytes.
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| H A D | NEWS | 289 * Rawtominc has new options -dimorder and -swap_bytes.
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| /dports/science/minc2/minc-release-2.2.00/libsrc2/doc/ |
| H A D | minc2_uguide.tex | 708 static char *dimorder[] = { "time", "zspace","yspace","xspace" }
710 miset_apparent_dimension_order_by_name(hvolume, 4, dimorder);
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| /dports/graphics/py-tifffile/tifffile-2021.8.30/tests/ |
| H A D | test_tifffile.py | 1913 def test_class_omexml(axes, autoaxes, shape, storedshape, dimorder, metadata): argument
1916 if not metadata and dimorder != 'XYCZT':
1924 assert dimorder in omexml
2003 def test_class_omexml_modulo(axes, shape, storedshape, sizetzc, dimorder): argument
2010 assert dimorder in omexml
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