Searched refs:dr1RcVec (Results 1 – 3 of 3) sorted by relevance
| /dports/biology/bowtie/bowtie-1.3.1/ |
| H A D | aligner_1mm.h | 315 TRangeSrcDrPtrVec *dr1RcVec; in create() local
317 dr1RcVec = new TRangeSrcDrPtrVec(); in create()
319 dr1RcVec = dr1FwVec; in create()
345 dr1RcVec->push_back(dr1Rc_Fw); in create()
346 dr1RcVec->push_back(dr1Rc_Bw); in create()
428 new TCostAwareRangeSrcDr(strandFix_, dr1RcVec, verbose_, quiet_, false), in create()
437 delete dr1RcVec; in create() local
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| H A D | aligner_23mm.h | 416 TRangeSrcDrPtrVec *dr1RcVec; in create() local
418 dr1RcVec = new TRangeSrcDrPtrVec(); in create()
420 dr1RcVec = dr1FwVec; in create()
463 dr1RcVec->push_back(dr1Rc_Fw); in create()
464 dr1RcVec->push_back(dr1Rc_Bw); in create()
465 dr1RcVec->push_back(dr1Rc_FwHalf); in create()
477 dr1RcVec->push_back(dr1Rc_BwHalf); in create()
624 new TCostAwareRangeSrcDr(strandFix_, dr1RcVec, verbose_, quiet_, false), in create()
633 delete dr1RcVec; in create() local
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| H A D | aligner_seed_mm.h | 693 TRangeSrcDrPtrVec *dr1RcVec; in create() local
697 dr1RcVec = new TRangeSrcDrPtrVec(); in create()
701 dr1RcVec = dr1FwVec; in create()
756 dr1RcVec->push_back(dr1Rc_Fw); in create()
906 dr1RcVec->push_back(drRc_Fw); in create()
907 dr1RcVec->push_back(drRc_Seed); in create()
1217 dr1RcVec->push_back(drRc_Fw); in create()
1218 dr1RcVec->push_back(drRc_Seed); in create()
1220 dr1RcVec->push_back(drRc_Seed12); in create()
1222 dr1RcVec->push_back(drRc_FwHalf); in create()
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