| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/app/blastdb/ |
| H A D | makeblastdb.cpp | 80 eBinaryASN, enumerator
168 case CFormatGuess::eBinaryASN: in s_ReadObject()
193 fg.GetFormatHints().AddPreferredFormat(CFormatGuess::eBinaryASN); in s_ReadObject()
715 case eBinaryASN: retval = CFormatGuess::eBinaryASN; break; in x_ConvertToCFormatGuessType()
728 case CFormatGuess::eBinaryASN: retval = eBinaryASN; break; in x_ConvertToSupportedType()
745 retval = eBinaryASN; in x_GetUserInputTypeHint()
793 fg.GetFormatHints().AddPreferredFormat(CFormatGuess::eBinaryASN); in x_GuessFileType()
809 case CFormatGuess::eBinaryASN: in x_AddSequenceData()
892 fg.GetFormatHints().AddPreferredFormat(CFormatGuess::eBinaryASN); in x_ProcessMaskData()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/blastdb/ |
| H A D | makeblastdb.cpp | 80 eBinaryASN, enumerator
168 case CFormatGuess::eBinaryASN: in s_ReadObject()
193 fg.GetFormatHints().AddPreferredFormat(CFormatGuess::eBinaryASN); in s_ReadObject()
715 case eBinaryASN: retval = CFormatGuess::eBinaryASN; break; in x_ConvertToCFormatGuessType()
728 case CFormatGuess::eBinaryASN: retval = eBinaryASN; break; in x_ConvertToSupportedType()
745 retval = eBinaryASN; in x_GetUserInputTypeHint()
793 fg.GetFormatHints().AddPreferredFormat(CFormatGuess::eBinaryASN); in x_GuessFileType()
809 case CFormatGuess::eBinaryASN: in x_AddSequenceData()
892 fg.GetFormatHints().AddPreferredFormat(CFormatGuess::eBinaryASN); in x_ProcessMaskData()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/table2asn/ |
| H A D | huge_file.cpp | 111 FG.GetFormatHints().AddPreferredFormat(CFormatGuess::eBinaryASN); in RecognizeContent()
123 case CFormatGuess::eBinaryASN: in RecognizeContent()
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| H A D | multireader.cpp | 412 FG.GetFormatHints().AddPreferredFormat(CFormatGuess::eBinaryASN); in xInputGetFormat()
431 FG.GetFormatHints().AddPreferredFormat(CFormatGuess::eBinaryASN); in xAnnotGetFormat()
811 case CFormatGuess::eBinaryASN: in OpenFile()
979 case CFormatGuess::eBinaryASN: in xCreateASNStream()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/formatguess/ |
| H A D | formatguess.cpp | 177 FormatStrings[ CFormatGuess::eBinaryASN ] = "Binary ASN.1"; in Run()
221 case CFormatGuess::eBinaryASN: in Run()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/ |
| H A D | format_guess_ex.cpp | 463 case CFormatGuess::eBinaryASN: in xGuessGenbankObjectType()
498 case CFormatGuess::eBinaryASN: in GuessFormatAndContent()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/readers/ |
| H A D | format_guess_ex.cpp | 461 case CFormatGuess::eBinaryASN: in xGuessGenbankObjectType()
496 case CFormatGuess::eBinaryASN: in GuessFormatAndContent()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objmgr/util/ |
| H A D | obj_sniff.hpp | 220 case CFormatGuess::eBinaryASN: in FormatGuess2Serial()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/unit_tests/api/ |
| H A D | blast_test_util.hpp | 90 case ncbi::CFormatGuess::eBinaryASN: in ReadObject()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objmgr/util/ |
| H A D | obj_sniff.hpp | 220 case CFormatGuess::eBinaryASN: in FormatGuess2Serial()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/unit_tests/api/ |
| H A D | blast_test_util.hpp | 90 case ncbi::CFormatGuess::eBinaryASN: in ReadObject()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/align_format/unit_test/ |
| H A D | blast_test_util.hpp | 101 case ncbi::CFormatGuess::eBinaryASN: in ReadObject()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/align_format/unit_test/ |
| H A D | blast_test_util.hpp | 101 case ncbi::CFormatGuess::eBinaryASN: in ReadObject()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/lds2/ |
| H A D | lds2.cpp | 555 case CFormatGuess::eBinaryASN: in CLDS2_ObjectParser()
1004 case CFormatGuess::eBinaryASN: in IsSupportedFormat()
1086 case CFormatGuess::eBinaryASN: in x_ParseFile()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/annotwriter/ |
| H A D | annotwriter.cpp | 733 FG.GetFormatHints().AddPreferredFormat(CFormatGuess::eBinaryASN); in xInitInputStream()
746 case CFormatGuess::eBinaryASN: in xInitInputStream()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/discrepancy_report/ |
| H A D | asndisc.cpp | 200 case CFormatGuess::eBinaryASN: in OpenUncompressedStream()
202 …objectStream.reset(CObjectIStream::Open(format==CFormatGuess::eBinaryASN ? eSerial_AsnBinary : eSe… in OpenUncompressedStream()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/data_loaders/lds2/ |
| H A D | lds2_dataloader.cpp | 324 case CFormatGuess::eBinaryASN: in x_LoadTSE()
624 case CFormatGuess::eBinaryASN: in GetChunk()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/util/ |
| H A D | format_guess.hpp | 58 eBinaryASN = 1, ///< Binary ASN.1 enumerator
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/util/ |
| H A D | format_guess.hpp | 58 eBinaryASN = 1, ///< Binary ASN.1 enumerator
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/agp_validate/ |
| H A D | AgpFastaComparator.cpp | 786 } else if( format == CFormatGuess::eBinaryASN || in x_ProcessObjects()
1027 case CFormatGuess::eBinaryASN: in x_SetBinaryVsText()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/test/objmgr/ |
| H A D | test_feat_tree.cpp | 221 case CFormatGuess::eBinaryASN: in s_GuessFormat()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/gap_stats/ |
| H A D | gap_stats.cpp | 861 for( auto a_format : {CFormatGuess::eBinaryASN, in x_ReadFileOrAccn()
871 case CFormatGuess::eBinaryASN: in x_ReadFileOrAccn()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/align/util/ |
| H A D | align_filter.cpp | 801 if (format != CFormatGuess::eBinaryASN && in x_GetRegionMap()
808 format == CFormatGuess::eBinaryASN ? eSerial_AsnBinary in x_GetRegionMap()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/asn_cleanup/ |
| H A D | asn_cleanup.cpp | 1198 fh.AddPreferredFormat(CFormatGuess::eBinaryASN); in x_OpenIStream()
1214 case CFormatGuess::eBinaryASN: in x_OpenIStream()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/asnval/ |
| H A D | asnval.cpp | 1164 case CFormatGuess::eBinaryASN: in OpenFile()
1167 …objectStream.reset(CObjectIStream::Open(format==CFormatGuess::eBinaryASN ? eSerial_AsnBinary : eSe… in OpenFile()
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