Searched refs:eGenomeNotCorrect (Results 1 – 6 of 6) sorted by relevance
657 if(stp->m_status != eGenomeNotCorrect && stp->m_status != eSelenocysteine) in PStop()1590 else if(indel.GetStatus() == CInDelInfo::eGenomeNotCorrect) in BuildGFF3Gap()1644 status = CInDelInfo::eGenomeNotCorrect; in readGFF3Gap()1795 if(indl->GetStatus() != CInDelInfo::eGenomeNotCorrect) { in CollectAttributes()1807 else if(s->m_status == CCDSInfo::eGenomeNotCorrect) in CollectAttributes()1982 status = CCDSInfo::eGenomeNotCorrect; in ParseAttributes()
236 indelstatus = CInDelInfo::eGenomeNotCorrect; in CAlignModel()
2102 … if(s->m_status == CCDSInfo::eSelenocysteine || s->m_status == CCDSInfo::eGenomeNotCorrect) { in ReplicatePStops()5073 …if(stp.m_status != CCDSInfo::eGenomeNotCorrect && stp.m_status != CCDSInfo::eSelenocysteine && !In… in SetConfirmedEnds()7351 …for( ;ic != editing_indels_frombtoa.end() && ic->GetStatus() != CInDelInfo::eGenomeNotCorrect; ++i… in CombineCorrectionsAndIndels()7381 …frombtoa.end() && ic->Loc() == pb && ic->GetStatus() == CInDelInfo::eGenomeNotCorrect && extra_rig… in CombineCorrectionsAndIndels()7626 i->SetStatus(CInDelInfo::eGenomeNotCorrect); in MapModelsToOrigContig()7633 i->SetStatus(CInDelInfo::eGenomeNotCorrect); in MapModelsToOrigContig()7707 …left != m_editing_indels.end() && ileft->GetStatus() != CInDelInfo::eGenomeNotCorrect; ++ileft); … in MapOneModelToEditedContig()7753 …ht != m_editing_indels.rend() && iright->GetStatus() != CInDelInfo::eGenomeNotCorrect; ++iright); … in MapOneModelToEditedContig()7942 if(indl->GetStatus() == CInDelInfo::eGenomeNotCorrect) { in SetGenomic()
900 case CInDelInfo::eGenomeNotCorrect: in AlignModelToSeqalign()
1404 if(indl->GetStatus() != CInDelInfo::eGenomeNotCorrect) in FilterAlignments()2261 … m_correction_data.m_correction_indels.back().SetStatus(CInDelInfo::eGenomeNotCorrect); in AddAlignment()
111 enum EStatus {eGenomeNotCorrect, eGenomeCorrect, eUnknown}; enumerator265 enum EStatus {eSelenocysteine, eGenomeNotCorrect, eGenomeCorrect, eUnknown}; enumerator