Searched refs:eSinglePoint (Results 1 – 6 of 6) sorted by relevance
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/gnomon/ |
| H A D | gnomon_model.hpp | 623 enum ERangeEnd{ eLeftEnd, eRightEnd, eSinglePoint }; enumerator
651 …MapRangeOrigToEdited(orig_range, withextras?eLeftEnd:eSinglePoint, withextras?eRightEnd:eSinglePoi… in MapRangeOrigToEdited()
720 … return MapRangeAtoB(a, b, r, withextras?eLeftEnd:eSinglePoint, withextras?eRightEnd:eSinglePoint); in MapRangeAtoB()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/gnomon/ |
| H A D | parse.cpp | 651 …SeqRange(gene.Limits().GetFrom(),reading_frame.GetFrom()), CAlignMap::eSinglePoint, CAlignMap::eLe… in GetGenes()
668 …(reading_frame.GetTo(),gene.Limits().GetTo()), CAlignMap::eRightEnd, CAlignMap::eSinglePoint) - 1; in GetGenes()
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| H A D | gnomon_seq.cpp | 879 TSignedSeqPos p = MapAtoB(m_orig_ranges, m_edited_ranges, orig_pos, eSinglePoint); in MapOrigToEdited()
892 return MapAtoB(m_edited_ranges, m_orig_ranges, edited_pos, eSinglePoint); in MapEditedToOrig()
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| H A D | gnomon_model.cpp | 242 … CAlignMap::ERangeEnd l = e.GetFrom() == left ? CAlignMap::eSinglePoint : CAlignMap::eLeftEnd; in RecalculateAlignMap()
243 … CAlignMap::ERangeEnd r = e.GetTo() == right ? CAlignMap::eSinglePoint : CAlignMap::eRightEnd; in RecalculateAlignMap()
1193 …dSeqRange(left_edge,exons_with_gaps[i+1].GetFrom()), CAlignMap::eLeftEnd, CAlignMap::eSinglePoint); in TrimEdgesToFrameInOtherAlignGaps()
1209 …ed(TSignedSeqRange(exons_with_gaps[i].GetTo(),right_edge), CAlignMap::eSinglePoint, CAlignMap::eRi… in TrimEdgesToFrameInOtherAlignGaps()
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| H A D | aligncollapser.cpp | 631 …ice ? CAlignMap::eLeftEnd : CAlignMap::eSinglePoint, e->m_ssplice ? CAlignMap::eRightEnd : CAlignM… in RemoveNotSupportedIntronsFromTranscript()
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| H A D | chainer.cpp | 5019 …mits_t = amap.MapRangeOrigToEdited(cds_limits_t, CAlignMap::eSinglePoint, CAlignMap::eSinglePoint); in SetConfirmedEnds()
7746 lend = CAlignMap::eSinglePoint; // is used for transcript exon in MapOneModelToEditedContig()
7792 rend = CAlignMap::eSinglePoint; // is used for transcript exon in MapOneModelToEditedContig()
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