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Searched refs:emalpha (Results 1 – 3 of 3) sorted by relevance

/dports/biology/tRNAscan-SE/tRNAscan-SE-2.0/src/
H A Dprior.c57 prior->emalpha[ty] = def_emalpha[ty]; in DefaultPrior()
111 prior->emalpha[i] = param; in ReadPrior()
201 fprintf(fp, "%f%s", prior->emalpha[i], in WritePrior()
H A Dprobify.c189 emvec[x] = emvec[x] + prior->emalpha[StatetypeIndex(statetype)] * em_prior[x]; in ProbifySingletEmission()
218 emx[x][y] = emx[x][y] + prior->emalpha[MATP_ST] * prior->matp_prior[x][y]; in ProbifyPairEmission()
H A Dstructs.h148 double emalpha[STATETYPES]; /* alpha's for symbol emissions */ member