Searched refs:enG (Results 1 – 10 of 10) sorted by relevance
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/gnomon/ |
H A D | hmm_inlines.hpp | 57 m_next[enG].Init((*i++)->GetPrev_order()); in Init() 61 m_next[enN].Average(m_next[enA],m_next[enC],m_next[enG],m_next[enT]); in Init() 68 m_next[enG].Average(mc0.m_next[enG],mc1.m_next[enG],mc2.m_next[enG],mc3.m_next[enG]); in Average() 70 m_next[enN].Average(m_next[enA],m_next[enC],m_next[enG],m_next[enT]); in Average() 77 m_next[enG].toScore(); in toScore() 110 if(seq[i+1] != enG || (seq[i+2] != enT && seq[i+2] != enC)) return BadScore(); // no GT/GC in Score() 135 if(seq[i-1] != enA || seq[i] != enG) return BadScore(); // no AG in Score()
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H A D | hmm.cpp | 406 m_score[enG] = (*i++)->GetValue(); in Init() 410 m_score[enN] = 0.25*(m_score[enA]+m_score[enC]+m_score[enG]+m_score[enT]); in Init() 417 m_score[enG] = 0.25*(mc0.m_score[enG]+mc1.m_score[enG]+mc2.m_score[enG]+mc3.m_score[enG]); in Average() 419 m_score[enN] = 0.25*(m_score[enA]+m_score[enC]+m_score[enG]+m_score[enT]); in Average() 426 m_score[enG] = (m_score[enG] <= 0) ? BadScore() : log(4*m_score[enG]); in toScore() 449 if(seq[i-2] != enA || seq[i-1] != enT || seq[i] != enG) return BadScore(); // no ATG in Score() 471 (seq[i+1] != enT || seq[i+2] != enA || seq[i+3] != enG) && in Score() 472 (seq[i+1] != enT || seq[i+2] != enG || seq[i+3] != enA)) return BadScore(); // no stop-codon in Score()
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H A D | gnomon_seq.hpp | 73 return enG; in fromACGT() 90 case enG: in toACGT()
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H A D | score.cpp | 49 else if(ss[ii] != enA || ss[ii+1] != enT || ss[ii+2] != enG) return false; in BEGIN_SCOPE() 59 (ss[ii] != enT || ss[ii+1] != enA || ss[ii+2] != enG) && in isStop() 60 (ss[ii] != enT || ss[ii+1] != enG || ss[ii+2] != enA)) return false; in isStop() 87 if(ss[ii-1] != enA || ss[ii] != enG) return false; in isAG() 96 if(ss[ii] != enG || ss[ii+1] != enT) return false; in isGT() 1123 if(s[i+1] == enA && s[i+2] == enG) m_asplit[strand][0][i] |= stpT; in Init() 1124 if(s[i+1] == enG && s[i+2] == enA) m_asplit[strand][0][i] |= stpT; in Init() 1126 if(s[i+1] == enG) m_asplit[strand][1][i] |= stpTA; in Init() 1131 if(s[i-1] == enT && s[i] == enG) m_dsplit[strand][1][i] |= stpTG; in Init() 1142 if(s[ii+1] == enG) m_asplit[strand][1][i] |= stpTA; in Init() [all …]
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H A D | gnomon_seq.cpp | 39 const EResidue k_toMinus[5] = { enT, enG, enC, enA, enN }; 77 static const EResidue s_ecodons0 [3] = { enA, enT, enG }; 79 static const EResidue s_ecodons2 [3] = { enT, enA, enG }; 80 static const EResidue s_ecodons3 [3] = { enT, enG, enA };
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H A D | gnomon_engine.cpp | 120 if (c == enC || c == enG) { in ResetRange()
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/dports/www/phpgroupware/phpgroupware-0.9.16.017/addressbook/setup/ |
H A D | phpgw_tr.lang | 79 forced preferences addressbook enG��lendirilmi� tercihler
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/gnomon/ |
H A D | gnomon_model.hpp | 839 enum EResidueNames { enA, enC, enG, enT, enN }; enumerator
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/dports/math/py-heyoka/heyoka.py-0.16.0/doc/notebooks/ |
H A D | The Keplerian billiard.ipynb | 125024 "kOnTp5uOIB7i4Ycf1j6Fbqx6zVr8oQ2YKergzdFTNG/enG+//ZYTJ06QJ08eAFq3bk2hQoXo378/\\\n", 140321 "9Ekovnbv3k2RIkXYvXu3Uds7OTnRqFEjKb5EkiQFmFDu2rVrNG/enG+//Va6HgqLi4uLY8uWLfTt\\\n", 157562 "gjAyKcBEoowfP151BJMwGAzs27cPgMqVK9OsWTO1gcQ7NW/enG+++Yb8+fOrjiKEValUqRIFCxZU\\\n",
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/dports/security/hashcat-legacy/hashcat-legacy-2.00/salts/ |
H A D | brute-vbulletin.salt | 630175 enG
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