Searched refs:entry_ci (Results 1 – 5 of 5) sorted by relevance
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/test/objmgr/ |
| H A D | test_seq_entry_ci.cpp | 178 TSeqEntryIter entry_ci( data_h, in s_TestExpectations() local
185 entry_ci && expected_entries[iEntryIdx].m_pchExpectedId != NULL; in s_TestExpectations()
186 ++iEntryIdx, ++entry_ci ) in s_TestExpectations()
192 entry_ci->IsSeq() ? in s_TestExpectations()
193 entry_ci->GetSeq().GetSeqId()->GetLocal().GetStr() : in s_TestExpectations()
194 entry_ci->GetSet().GetId().GetStr() ); in s_TestExpectations()
203 const int iDepth = entry_ci.GetDepth(); in s_TestExpectations()
210 BOOST_CHECK_MESSAGE( ! entry_ci, "TSeqEntryIter returned extra items" ); in s_TestExpectations()
212 BOOST_CHECK_MESSAGE( entry_ci, "TSeqEntryIter ended too soon" ); in s_TestExpectations()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/ |
| H A D | apply_object.cpp | 248 …for (CSeq_entry_CI entry_ci(*handle, CSeq_entry_CI::fRecursive | CSeq_entry_CI::fIncludeGivenEntry… in GetSeqEntryForSeqdesc() local
249 if (entry_ci->IsSetDescr()) { in GetSeqEntryForSeqdesc()
250 ITERATE (CBioseq::TDescr::Tdata, dit, entry_ci->GetDescr().Get()) { in GetSeqEntryForSeqdesc()
252 return *entry_ci; in GetSeqEntryForSeqdesc()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/edit/ |
| H A D | apply_object.cpp | 248 …for (CSeq_entry_CI entry_ci(*handle, CSeq_entry_CI::fRecursive | CSeq_entry_CI::fIncludeGivenEntry… in GetSeqEntryForSeqdesc() local
249 if (entry_ci->IsSetDescr()) { in GetSeqEntryForSeqdesc()
250 ITERATE (CBioseq::TDescr::Tdata, dit, entry_ci->GetDescr().Get()) { in GetSeqEntryForSeqdesc()
252 return *entry_ci; in GetSeqEntryForSeqdesc()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/cleanup/ |
| H A D | newcleanupp.cpp | 418 CSeq_entry_CI entry_ci( bssh ); in BasicCleanupBioseqSetHandle() local
419 CSeq_entry_EditHandle edit = entry_ci->GetEditHandle(); in BasicCleanupBioseqSetHandle()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/cleanup/ |
| H A D | newcleanupp.cpp | 418 CSeq_entry_CI entry_ci( bssh ); in BasicCleanupBioseqSetHandle() local
419 CSeq_entry_EditHandle edit = entry_ci->GetEditHandle(); in BasicCleanupBioseqSetHandle()
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