Searched refs:errorProb (Results 1 – 4 of 4) sorted by relevance
65 appendValue(options.errorProb, prob); in main()68 if (empty(options.errorProb)) in main()77 resize(options.readLengths, length(options.errorProb), 0); in main()
86 String<double> errorProb; in main() local113 appendValue(errorProb, error); in main()131 simulateReads(reads, errorProb, store); in main()
54 double errorProb = 1.0 - (1.0 - sequencingError) * (1.0 - options.mutationRate); in main() local57 std::cout << i << '\t' << errorProb << std::endl; in main()
232 String<TProb> errorProb; // error probability per base member2439 resize(options.errorProb, length(options.avrgQuality));2523 p_prefix[0] = (TFloat)1.0 - options.errorProb[0]; // 0 error2524 p_prefix[1] = options.errorProb[0]; // 1 error2532 …idx - maxErrors1] * ((TFloat)1.0 - options.errorProb[i]) + p_prefix[idx - maxErrors1 - 1] * option…2589 p[idx++] = (TFloat)1.0 - options.errorProb[i]; // 0 error2590 p[idx++] = options.errorProb[i]; // 1 error2603 …= p[idx - maxErrors1] * ((TFloat)1.0 - options.errorProb[i]) + p[idx - maxErrors1 - 1] * options.e…2615 p_last[idx++] = (TFloat)1.0 - options.errorProb[i]; // 0 error2616 p_last[idx++] = options.errorProb[i]; // 1 error[all …]