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Searched refs:feat_list (Results 1 – 25 of 48) sorted by relevance

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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/
H A Dfield_handler.cpp200 vector<CConstRef<CSeq_feat> > feat_list; in s_GetProtFeatures() local
206 feat_list.push_back(object); in s_GetProtFeatures()
210 return feat_list; in s_GetProtFeatures()
216 vector<CConstRef<CSeq_feat> > feat_list; in GetRelatedFeatures() local
226 feat_list = s_GetProtFeatures(p_bsh, constraint_type); in GetRelatedFeatures()
256 feat_list.insert(feat_list.end(), this_list.begin(), this_list.end()); in GetRelatedFeatures()
264 feat_list.push_back(f); in GetRelatedFeatures()
274 feat_list.push_back(it->second); in GetRelatedFeatures()
280 feat_list.push_back(f); in GetRelatedFeatures()
284 feat_list.push_back(f); in GetRelatedFeatures()
[all …]
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/edit/
H A Dfield_handler.cpp200 vector<CConstRef<CSeq_feat> > feat_list; in s_GetProtFeatures() local
206 feat_list.push_back(object); in s_GetProtFeatures()
210 return feat_list; in s_GetProtFeatures()
216 vector<CConstRef<CSeq_feat> > feat_list; in GetRelatedFeatures() local
226 feat_list = s_GetProtFeatures(p_bsh, constraint_type); in GetRelatedFeatures()
256 feat_list.insert(feat_list.end(), this_list.begin(), this_list.end()); in GetRelatedFeatures()
264 feat_list.push_back(f); in GetRelatedFeatures()
274 feat_list.push_back(it->second); in GetRelatedFeatures()
280 feat_list.push_back(f); in GetRelatedFeatures()
284 feat_list.push_back(f); in GetRelatedFeatures()
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/validator/
H A Dfeature_match.cpp59 const TFeatList & feat_list, CScope* scope, ENoteCDS eNoteCDS) in s_SetUpXrefPairs() argument
62 cds_list.reserve(feat_list.size() / 2); in s_SetUpXrefPairs()
63 mrna_list.reserve(feat_list.size() / 2); in s_SetUpXrefPairs()
66 for (auto& feat_it : feat_list) { in s_SetUpXrefPairs()
344 void CmRNAAndCDSIndex::SetBioseq(const std::vector<CMappedFeat> *feat_list, CScope* scope) in SetBioseq() argument
349 if (!feat_list) { in SetBioseq()
354 m_CdsList, m_mRNAList, *feat_list, scope, eNoteCDS_Yes); in SetBioseq()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/phy_tree/
H A Dbio_tree_conv.hpp299 typename TContainerDict::Tdata& feat_list = fd.Set(); in BioTreeConvert2Container() local
312 feat_list.push_back(d); in BioTreeConvert2Container()
347 const typename TContainerDict::Tdata& feat_list = fd.Get(); in BioTreeConvertContainer2Dynamic() local
349 ITERATE(typename TContainerDict::Tdata, it, feat_list) { in BioTreeConvertContainer2Dynamic()
440 typename TContainerDict::Tdata& feat_list = fd.Set(); in BioTreeForestConvert2Container() local
453 feat_list.push_back(d); in BioTreeForestConvert2Container()
486 const typename TContainerDict::Tdata& feat_list = fd.Get(); in BioTreeConvertContainer2DynamicForest() local
488 ITERATE(typename TContainerDict::Tdata, it, feat_list) { in BioTreeConvertContainer2DynamicForest()
751 typename TContainerDict::Tdata& feat_list = fd.Set(); in BioTreeAddFeatureToDictionary() local
754 ITERATE(typename TContainerDict::Tdata, it, feat_list) { in BioTreeAddFeatureToDictionary()
[all …]
/dports/ftp/smbftpd/smbftpd-2.4/cmd/
H A Dcmd_feat.c23 struct feat_tab feat_list[] = { in cmd_feat() local
36 for (c = feat_list; c->name != NULL; c++) in cmd_feat()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/phy_tree/test/
H A Dtest_biotree.cpp98 TContainerDict::Tdata& feat_list = fd.Set(); in TestBioTreeContainer() local
103 feat_list.push_back(d); in TestBioTreeContainer()
108 feat_list.push_back(d); in TestBioTreeContainer()
113 feat_list.push_back(d); in TestBioTreeContainer()
118 feat_list.push_back(d); in TestBioTreeContainer()
/dports/graphics/opencv/opencv-4.5.3/samples/dnn/
H A Dperson_reid.py68 feat_list = []
81 feat_list.append(feat)
84 feats = np.concatenate(feat_list, axis = 0)
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/test/objmgr/
H A Dtest_annot_ci.cpp399 TTestResult::TObjectList feat_list; in Run() local
404 feat_list.push_back(feat); in Run()
406 TTestResult::Check(feat_list, args, title); in Run()
/dports/databases/proftpd-mod_sql_postgres/proftpd-1.3.7c/tests/t/lib/ProFTPD/TestSuite/
H A DUtils.pm795 my $feat_list;
806 push(@$feat_list, $feature);
811 push(@$feat_list, "OpenSSL_FIPS");
819 my $matches = grep { /^$feat$/i } @$feat_list;
/dports/databases/proftpd-mod_sql_sqlite/proftpd-1.3.7c/tests/t/lib/ProFTPD/TestSuite/
H A DUtils.pm795 my $feat_list;
806 push(@$feat_list, $feature);
811 push(@$feat_list, "OpenSSL_FIPS");
819 my $matches = grep { /^$feat$/i } @$feat_list;
/dports/databases/proftpd-mod_sql_mysql/proftpd-1.3.7c/tests/t/lib/ProFTPD/TestSuite/
H A DUtils.pm795 my $feat_list;
806 push(@$feat_list, $feature);
811 push(@$feat_list, "OpenSSL_FIPS");
819 my $matches = grep { /^$feat$/i } @$feat_list;
/dports/databases/proftpd-mod_sql_tds/proftpd-1.3.7c/tests/t/lib/ProFTPD/TestSuite/
H A DUtils.pm795 my $feat_list;
806 push(@$feat_list, $feature);
811 push(@$feat_list, "OpenSSL_FIPS");
819 my $matches = grep { /^$feat$/i } @$feat_list;
/dports/databases/proftpd-mod_sql_odbc/proftpd-1.3.7c/tests/t/lib/ProFTPD/TestSuite/
H A DUtils.pm795 my $feat_list;
806 push(@$feat_list, $feature);
811 push(@$feat_list, "OpenSSL_FIPS");
819 my $matches = grep { /^$feat$/i } @$feat_list;
/dports/net/proftpd-mod_ldap/proftpd-1.3.7c/tests/t/lib/ProFTPD/TestSuite/
H A DUtils.pm795 my $feat_list;
806 push(@$feat_list, $feature);
811 push(@$feat_list, "OpenSSL_FIPS");
819 my $matches = grep { /^$feat$/i } @$feat_list;
/dports/security/proftpd-mod_clamav/proftpd-1.3.7c/tests/t/lib/ProFTPD/TestSuite/
H A DUtils.pm795 my $feat_list;
806 push(@$feat_list, $feature);
811 push(@$feat_list, "OpenSSL_FIPS");
819 my $matches = grep { /^$feat$/i } @$feat_list;
/dports/ftp/proftpd/proftpd-1.3.7c/tests/t/lib/ProFTPD/TestSuite/
H A DUtils.pm795 my $feat_list;
806 push(@$feat_list, $feature);
811 push(@$feat_list, "OpenSSL_FIPS");
819 my $matches = grep { /^$feat$/i } @$feat_list;
/dports/ftp/proftpd-mod_vroot/proftpd-1.3.7c/tests/t/lib/ProFTPD/TestSuite/
H A DUtils.pm795 my $feat_list;
806 push(@$feat_list, $feature);
811 push(@$feat_list, "OpenSSL_FIPS");
819 my $matches = grep { /^$feat$/i } @$feat_list;
/dports/sysutils/burp/burp-2.4.0/src/server/
H A Dextra_comms.c105 long feat_list; member
514 || (vers->feat_list=version_to_long("1.3.0"))<0 in vers_init()
571 if(vers.cli==vers.feat_list) in extra_comms()
/dports/sysutils/burp-devel/burp-2.5.4/src/server/
H A Dextra_comms.c105 long feat_list; member
514 || (vers->feat_list=version_to_long("1.3.0"))<0 in vers_init()
571 if(vers.cli==vers.feat_list) in extra_comms()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objtools/validator/
H A Dfeature_match.hpp25 void SetBioseq(const std::vector<CMappedFeat> *feat_list, CScope* scope);
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/asn2fasta/
H A Dasn2fasta.cpp609 list<string> feat_list; in x_InitFeatDisplay() local
612 feat_list, in x_InitFeatDisplay()
615 if (feat_list.empty()) { in x_InitFeatDisplay()
618 for(const string& feat_name : feat_list) { in x_InitFeatDisplay()
/dports/biology/ncbi-toolkit/ncbi/desktop/
H A Ddotvibrant.c3206 while (feat_list) in DOT_PointCursorOnFeature()
3215 feat_list=feat_list->next; in DOT_PointCursorOnFeature()
3238 DOTSelFeatPtr feat_list=NULL; in DOT_FindFeatureInViewer() local
3248 if (!feat_list) in DOT_FindFeatureInViewer()
3255 feat_list=feat_list->next; in DOT_FindFeatureInViewer()
3261 if (feat_list) in DOT_FindFeatureInViewer()
3262 return feat_list; in DOT_FindFeatureInViewer()
3277 DOTSelFeatPtr feat_list=NULL; in DOT_FindBetweenFeats() local
3291 if (!feat_list) in DOT_FindBetweenFeats()
3306 feat_list->next=NULL; in DOT_FindBetweenFeats()
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H A Dingenwin.c5031 LisT feat_list; member
5778 if (GetItemStatus(aap->feat_list, i+1)){ in Ing_mRNATrackTomRNAFilter()
6028 SetItemStatus(feat_list, i+1, TRUE); in Ing_SetFeatList()
6746 LisT feat_list; member
6769 Reset(sformp->feat_list); in Ing_ResetAlignList()
6780 ListItem(sformp->feat_list, buf); in Ing_ResetAlignList()
6933 if (GetItemStatus(sformp->feat_list, i+1)){ in Ing_AddAlignList()
7082 ListItem(sformp->feat_list, buf); in Ing_CreateReOrderAlignForm()
7146 SetItemStatus(feat_list, i+1, TRUE); in Ing_SetShowList()
7148 SetItemStatus(feat_list, i+1, FALSE); in Ing_SetShowList()
[all …]
/dports/biology/ncbi-toolkit/ncbi/sequin/
H A Dsequin5.c14917 feat_list = ValNodeFree (feat_list); in AdjustConvertFeaturesForBioSrcToRepeatRegion()
14924 return feat_list; in AdjustConvertFeaturesForBioSrcToRepeatRegion()
14933 vnp = *feat_list; in RemoveNonPseudoFeatures()
14997 return feat_list; in AdjustCDSToMiscFeatList()
15223 if (cip == NULL || feat_list == NULL || *feat_list == NULL) return; in RemoveClickableItemFeaturesFromFeatureList()
15261 return feat_list; in AdjustRegionConversionFeatures()
15356 feat_list = ValNodeFree (feat_list); in NewConvertFeaturesByList()
15391 feat_list = ValNodeFree (feat_list); in NewConvertFeaturesByList()
15411 feat_list = ValNodeFree (feat_list); in NewConvertFeaturesByList()
15479 feat_list = ValNodeFree (feat_list); in NewConvertFeaturesByList()
[all …]
H A Dsequin.h1500 extern Boolean DoBioseqFeaturesMatchSequenceConstraintX (BioseqPtr bsp, ValNodePtr feat_list, Strin…
1613 extern void BulkEditorFeatList (Uint2 entityID, ValNodePtr feat_list);
1618 extern Uint1 GetSubtypeForBulkEdit (ValNodePtr feat_list);
1729 NLM_EXTERN void BulkEditorObjectList (Uint2 entityID, CharPtr title, ValNodePtr feat_list, BulkEdFi…
1734 ValNodePtr feat_list,
1743 ValNodePtr feat_list,

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