/dports/biology/viennarna/ViennaRNA-2.4.18/src/bin/ |
H A D | RNAplot.c | 577 free(ffname); in process_record() 624 free(ffname); in process_record() 635 free(ffname); in process_record() 646 free(ffname); in process_record() 666 free(ffname); in process_record() 732 free(ffname); in process_alignment_record() 748 free(ffname); in process_alignment_record() 759 free(ffname); in process_alignment_record() 770 free(ffname); in process_alignment_record() 785 free(ffname); in process_alignment_record() [all …]
|
H A D | RNAplfold.c | 448 char *fname1, *fname2, *fname3, *fname4, *ffname, *tmp_string; in main() local 464 ffname = vrna_strdup_printf("%s%sdp.ps", SEQ_ID, filename_delim); in main() 479 tmp_string = vrna_filename_sanitize(ffname, filename_delim); in main() 480 free(ffname); in main() 481 ffname = tmp_string; in main() 555 PS_dot_plot_turn(orig_sequence, data.plist, ffname, pairdist); in main() 613 free(ffname); in main()
|
/dports/science/apbs/apbs-pdb2pqr-apbs-1.5-102-g500c1473/pdb2pqr/src/ |
H A D | aa.py | 78 self.ffname = self.name 157 self.ffname = "NEUTRAL-N%s" % self.ffname 159 self.ffname = "N%s" % self.ffname 162 self.ffname = "NEUTRAL-C%s" % self.ffname 164 self.ffname = "C%s" % self.ffname 270 self.ffname = "ASH" 588 self.ffname = "N%s" % self.ffname 591 self.ffname = "NEUTRAL-C%s" % self.ffname 593 self.ffname = "C%s" % self.ffname 740 self.ffname = "WAT" [all …]
|
H A D | na.py | 77 self.ffname = self.name 148 if self.is5term: self.ffname = self.ffname + "5" 149 if self.is3term: self.ffname = self.ffname + "3" 177 if self.hasAtom("O2'"): self.ffname = "RA" 178 else: self.ffname = "DA" 207 if self.hasAtom("O2'"): self.ffname = "RC" 208 else: self.ffname = "DC" 237 if self.hasAtom("O2'"): self.ffname = "RG" 238 else: self.ffname = "DG" 268 self.ffname = "DT" [all …]
|
/dports/science/InsightToolkit/ITK-5.0.1/Modules/ThirdParty/pygccxml/src/pygccxml/parser/ |
H A D | source_reader.py | 225 ffname = source_file 226 if not os.path.isabs(ffname): 227 ffname = self.__file_full_name(source_file) 228 command_line = self.__create_command_line(ffname, xml_file) 311 ffname = self.__file_full_name(source_file) 317 xml_file = self.create_xml_file(ffname) 320 ffname, self.__config, decls, files) 347 ffname = self.__file_full_name(xml_file) 349 decls = self.__dcache.cached_value(ffname, self.__config) 352 decls, _ = self.__parse_xml_file(ffname) [all …]
|
/dports/net/megacmd/MEGAcmd-1.4.1_Win/sdk/tests/python/ |
H A D | sync_test_base.py | 239 ffname = os.path.join(dname, fname) 246 self.file_create(ffname, fsize) 255 md5_str = self.md5_for_file(ffname) 309 ffname=normalizeandescape(ffname) 322 with open(ffname): 335 md5_str = self.md5_for_file(ffname) 587 os.remove(ffname) 596 if not os.path.exists(ffname): 600 if os.path.exists(ffname): 611 with open(ffname): [all …]
|
/dports/textproc/py-pygccxml/pygccxml-2.2.1/pygccxml/parser/ |
H A D | source_reader.py | 230 ffname = source_file 231 if not os.path.isabs(ffname): 232 ffname = self.__file_full_name(source_file) 233 command_line = self.__create_command_line(ffname, xml_file) 316 ffname = self.__file_full_name(source_file) 322 xml_file = self.create_xml_file(ffname) 325 ffname, self.__config, decls, files) 352 ffname = self.__file_full_name(xml_file) 354 decls = self.__dcache.cached_value(ffname, self.__config) 357 decls, _ = self.__parse_xml_file(ffname) [all …]
|
/dports/science/ergo/ergo-3.8/source/basisset/ |
H A D | basisset.cc | 139 char ffname[256]; in read_basisset_file() local 141 strncpy(ffname, dirv[i], sizeof(ffname)); in read_basisset_file() 142 if(len>0 && ffname[len-1] != '/') in read_basisset_file() 143 strncat(ffname, "/", sizeof(ffname)-1-len); in read_basisset_file() 144 strncat(ffname, fileName, sizeof(ffname)-2-len); in read_basisset_file() 146 "Trying basis set file '%s'...", ffname); in read_basisset_file() 147 if( (f=fopen(ffname, "rt")) != NULL) in read_basisset_file()
|
/dports/biology/emboss/EMBOSS-6.6.0/emboss/ |
H A D | dastest.c | 39 const AjPStr ffname); 83 AjPStr ffname = NULL; in main() local 324 ajFmtPrintS(&ffname, "%S.%S", source->uri, in main() 329 dastestSaveRawFeatures(buff, ffname); in main() 336 dastestSaveMappedFeatures(ft, ffname, in main() 339 ajStrDel(&ffname); in main() 471 static void dastestSaveRawFeatures(AjPFilebuff buff, const AjPStr ffname) in dastestSaveRawFeatures() argument 477 ajFmtPrintS(&ffnamee, "%S.raw.dasgff", ffname); in dastestSaveRawFeatures() 512 const AjPStr ffname, in dastestSaveMappedFeatures() argument 525 ajWarn("null feature table, %S", ffname); in dastestSaveMappedFeatures() [all …]
|
/dports/science/plumed/plumed2-2.7.2/user-doc/ |
H A D | test_examples | 27 ffname=$(printf "%02d" $i) 29 …line-1)) example-check/$fname.dat | tail -n $(($eline-1-$sline)) > example-check/$fname/$ffname.dat 30 wrongc=`grep "this is wrong" example-check/$fname/$ffname.dat | wc -l | awk '{print $1}'` 32 rm example-check/$fname/$ffname.dat 35 …hasname=`grep "#SETTINGS" example-check/$fname/$ffname.dat | grep "FILENAME=" | wc -l | awk '{prin… 37 …filename=`grep "#SETTINGS" example-check/$fname/$ffname.dat | awk '{for(i=1;i<=NF;++i){if(match($… 38 cp example-check/$fname/$ffname.dat example-check/$fname/$filename
|
/dports/net/py-pyroute2.core/pyroute2.core-0.6.5/pr2modules/netlink/diag/ |
H A D | __init__.py | 75 if self[self.ffname] == AF_INET: 80 elif self[self.ffname] == AF_INET6: 89 ffname = 'sdiag_family' variable in inet_diag_req 105 ffname = 'idiag_family' variable in inet_diag_msg
|
/dports/science/cdk/cdk-cdk-2.3/tool/builder3d/src/main/java/org/openscience/cdk/modeling/builder3d/ |
H A D | ModelBuilder3D.java | 96 …private ModelBuilder3D(TemplateHandler3D templateHandler, String ffname, IChemObjectBuilder builde… in ModelBuilder3D() argument 99 setForceField(ffname, builder); in ModelBuilder3D() 102 public static ModelBuilder3D getInstance(TemplateHandler3D templateHandler, String ffname, in getInstance() argument 104 …if (ffname == null || ffname.length() == 0) throw new CDKException("The given ffname is null or em… in getInstance() 107 String builderCode = templateHandler.getClass().getName() + "#" + ffname; in getInstance() 109 ModelBuilder3D builder = new ModelBuilder3D(templateHandler, ffname, chemObjectBuilder); in getInstance() 134 private void setForceField(String ffname, IChemObjectBuilder builder) throws CDKException { in setForceField() argument 135 if (ffname == null) { in setForceField() 136 ffname = "mm2"; in setForceField() 139 forceFieldName = ffname; in setForceField() [all …]
|
/dports/science/apbs/apbs-pdb2pqr-apbs-1.5-102-g500c1473/doc/formats/ |
H A D | apbs-xml-parm.rst | 10 <ffname> 22 </ffname> 26 ``ffname``
|
/dports/www/py-wfuzz/wfuzz-3.1.0/src/wfuzz/plugin_api/ |
H A D | urlutils.py | 22 def ffname(self): member in FuzzRequestParse 37 return os.path.splitext(self.ffname)[1] 45 return os.path.splitext(self.ffname)[0]
|
/dports/editors/vim/vim-8.2.3745/src/ |
H A D | buffer.c | 1997 vim_free(ffname); in buflist_new() 2494 char_u *ffname; in buflist_findname_exp() local 2508 vim_free(ffname); in buflist_findname_exp() 2538 char_u *ffname, in buflist_findname_stat() argument 3330 if (ffname == NULL || *ffname == NUL) in setfname() 3379 vim_free(ffname); in setfname() 3477 char_u *ffname, in setaltfname() argument 3573 char_u *ffname in otherfile_buf() argument 3580 if (ffname == NULL || *ffname == NUL || buf->b_ffname == NULL) in otherfile_buf() 5176 *sfname = *ffname; in fname_expand() [all …]
|
H A D | ex_cmds.c | 1885 char_u *ffname; in do_write() local 1897 ffname = eap->arg; in do_write() 1905 ffname = browse_file; in do_write() 1908 if (*ffname == NUL) in do_write() 1919 fname = ffname; in do_write() 2486 char_u *ffname, in do_ecmd() argument 2552 if (ffname == NULL || !mch_isdir(ffname)) in do_ecmd() 2567 sfname = ffname; in do_ecmd() 2574 && (ffname == NULL || *ffname == NUL)) in do_ecmd() 2577 if (ffname == NULL) in do_ecmd() [all …]
|
/dports/math/scilab/scilab-6.1.1/scilab/modules/statistics/includes/ |
H A D | CdfBase.h | 82 #define mkcdf(ffname, minrhs, maxrhs, minlhs, maxlhs, itvar) \ argument 84 (cdf_fptr)C2F(ffname), itvar, end_item(itvar)}
|
/dports/editors/vim/vim-8.2.3745/src/proto/ |
H A D | buffer.pro | 25 buf_T *buflist_findname(char_u *ffname); 39 buf_T *setaltfname(char_u *ffname, char_u *sfname, linenr_T lnum); 44 int otherfile(char_u *ffname); 54 void fname_expand(buf_T *buf, char_u **ffname, char_u **sfname);
|
/dports/editors/neovim/neovim-0.6.1/src/nvim/ |
H A D | buffer.c | 1679 xfree(ffname); in buflist_new() 1723 xfree(ffname); in buflist_new() 1741 if (ffname != NULL) { in buflist_new() 2066 char_u *ffname; in buflist_findname_exp() local 2078 if (ffname != NULL) { in buflist_findname_exp() 2080 xfree(ffname); in buflist_findname_exp() 2775 if (ffname == NULL || *ffname == NUL) { in setfname() 2801 xfree(ffname); in setfname() 2976 if (ffname == NULL || *ffname == NUL || buf->b_ffname == NULL) { in otherfile_buf() 4671 *sfname = *ffname; in fname_expand() [all …]
|
H A D | runtime.c | 650 char *const ffname = fix_fname((char *)fname); in add_pack_dir_to_rtp() local 653 if (ffname == NULL) { in add_pack_dir_to_rtp() 659 size_t fname_len = strlen(ffname); in add_pack_dir_to_rtp() 676 bool match = path_fnamencmp(rtp_ffname, ffname, fname_len) == 0; in add_pack_dir_to_rtp() 765 xfree(ffname); in add_pack_dir_to_rtp() 777 char *const ffname = fix_fname((char *)fname); in load_pack_plugin() local 778 size_t len = strlen(ffname) + STRLEN(ftpat); in load_pack_plugin() 781 vim_snprintf((char *)pat, len, "%s/plugin/**/*.vim", ffname); // NOLINT in load_pack_plugin() 783 vim_snprintf((char *)pat, len, "%s/plugin/**/*.lua", ffname); // NOLINT in load_pack_plugin() 792 vim_snprintf((char *)pat, len, ftpat, ffname); in load_pack_plugin() [all …]
|
/dports/math/reduce/Reduce-svn5758-src/csl/cslbase/ |
H A D | bytes2.cpp | 68 char ffname[32]; variable 69 if (fflength >= sizeof(ffname)) fflength = sizeof(ffname)-1; 72 ffname[fflength] = 0; 1667 if (fflength >= sizeof(ffname)) fflength = sizeof(ffname)-1; 1670 ffname[fflength] = 0; 1711 if (fflength >= sizeof(ffname)) fflength = sizeof(ffname)-1; 1714 ffname[fflength] = 0; 1756 if (fflength >= sizeof(ffname)) fflength = sizeof(ffname)-1; 1759 ffname[fflength] = 0; 1801 if (fflength >= sizeof(ffname)) fflength = sizeof(ffname)-1; [all …]
|
/dports/math/freefem++/FreeFem-sources-4.6/plugin/seq/ |
H A D | iohdf5.cpp | 201 string *ffname = GetAny< string * >((*filename)(stack)); in operator ( )() local 214 cout << "filename data hdf5 solution () : " << ffname << endl; in operator ( )() 221 WriteXdmf *XdmfSolFile2D = new WriteXdmf(ffname->c_str( ), nt, nv); in operator ( )() 241 WriteHdf5 *Hdf5SolFile2D = new WriteHdf5(ffname->c_str( ), nt, nv); in operator ( )() 513 string *ffname = GetAny< string * >((*filename)(stack)); in operator ( )() local 527 cout << "filename data hdf5 solution () : " << ffname << endl; in operator ( )() 534 WriteXdmf *XdmfSolFile3D = new WriteXdmf(ffname->c_str( ), nt, nv); in operator ( )() 548 WriteHdf5 *Hdf5SolFile3D = new WriteHdf5(ffname->c_str( ), nt, nv); in operator ( )()
|
/dports/comms/gpredict/gpredict-2.2.1/src/ |
H A D | loc-tree.c | 95 gchar *ffname; in loc_tree_create() local 99 ffname = data_file_name("locations.dat"); in loc_tree_create() 101 ffname = g_strdup(fname); in loc_tree_create() 204 model = loc_tree_create_and_fill_model(ffname); in loc_tree_create() 207 g_free(ffname); in loc_tree_create()
|
/dports/games/billardgl/BillardGL-1.75/src/ |
H A D | bmp.cpp | 241 char ffname[60]; in loadBMP() local 242 sprintf(ffname,"%s%s",PFAD,fname); in loadBMP() 244 f = fopen(ffname, "rb"); in loadBMP() 247 cerr << "unable to open " << ffname << "!" << endl; in loadBMP() 253 cerr << ffname << " is not a bitmap-file." << endl; in loadBMP()
|
/dports/science/nest/nest-simulator-3.1/extras/ |
H A D | find_imports.py | 133 ffname = os.path.join(dirpath, fname) variable 134 with open(ffname, encoding='utf-8') as pyfile:
|