Searched refs:final_MATCH_buffer1 (Results 1 – 1 of 1) sorted by relevance
2539 int * final_MATCH_buffer1, *final_MISMATCH_buffer1, *final_PENALTY_buffer1; local2556 …final_MATCH_buffer1 = malloc(sizeof(int) * 2 * global_context -> config.multi_best_reads * MAX_ALI…2658 int * current_MATCH_buffer = is_second_read?final_MATCH_buffer2:final_MATCH_buffer1;2751 int * current_MATCH_buffer = is_second_read?final_MATCH_buffer2:final_MATCH_buffer1;2837 int r1_matched = final_MATCH_buffer1[r1_best_id];2870 final_SCORE = weight * (final_MATCH_buffer1[r1_best_id] + final_MATCH_buffer2[r2_best_id]);2903 …final_SCORE = final_SCORE * 3000llu + (final_MATCH_buffer1[r1_best_id] + final_MATCH_buffer2[r2_be…2954 int r1_matched = final_MATCH_buffer1[r1_best_id];3028 free(final_MATCH_buffer1);