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Searched refs:flatParents (Results 1 – 5 of 5) sorted by relevance

/dports/biology/hyphy/hyphy-2.5.33/src/core/
H A Dlikefuncocl.cpp162 flatParents, variable
239 …model = (void*)malloc(sizeof(cl_float)*roundCharacters*roundCharacters*(flatParents.lLen… in setupContext()
244 printf("flatParents: %ld\n", flatParents.lLength); in setupContext()
379 sizeof(cl_float)*roundCharacters*roundCharacters*(flatParents.lLength-1), in setupContext()
705 parentCode = flatParents.list_data[nodeCode]; in oclmain()
727 sizeof(cl_float)*roundCharacters*roundCharacters*(flatParents.lLength-1), in oclmain()
769 parentCode = flatParents.list_data[nodeCode]; in oclmain()
1072 flatParents = eflatParents; in launchmdsocl()
H A Dtree.cpp646 flatParents.Clear(); in SetUp()
656 flatParents << (long)ti.GetNode()->get_parent(); in SetUp()
665 flatParents << flatINodeParents; in SetUp()
671 flatParents.Each ([&] (long value, unsigned long index) -> void { in SetUp()
675 flatParents[index] = -1L; in SetUp()
2551 marked_nodes [flatParents.list_data[node_index]] = true; in ComputeReleafingCostChar()
2592 marked_nodes [this->flatParents.list_data[di]] = true; in ComputeReleafingCost()
2880 parent_index = flatParents.list_data[my_index]; in DetermineNodesForUpdate()
2888 parent_index = flatParents.list_data[dir_index]; in DetermineNodesForUpdate()
2910 for (long i = 0; i < flatParents.lLength - 1; i++) { in DetermineNodesForUpdate()
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H A Dtree_evaluator.cpp982 parentCode = flatParents.list_data [nodeCode]; in ComputeTreeBlockByBranch()
1811 myParent = flatParents.list_data[myParent+flatLeaves.lLength]; in ComputeBranchCache()
1837 myParent = flatParents.list_data[k]; in ComputeBranchCache()
1940 parentCode = flatParents.list_data [nodeCode]; in ComputeBranchCache()
/dports/biology/hyphy/hyphy-2.5.33/src/core/include/
H A Dcalcnode copy.h92 _SimpleList& flatParents,
837 flatParents, variable
H A Dtree.h314 flatParents, variable