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Searched refs:fmt_choice (Results 1 – 2 of 2) sorted by relevance

/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/blastinput/
H A Dblast_args.cpp2693 string fmt_choice = in ParseFormattingString() local
2697 custom_fmt_spec.assign(fmt_choice, pos+1, in ParseFormattingString()
2699 fmt_choice.erase(pos); in ParseFormattingString()
2719 try { val = NStr::StringToInt(fmt_choice); } in ParseFormattingString()
2926 if (fmt_choice == "sam") { in ExtractAlgorithmOptions()
2929 else if (fmt_choice == "tabular") { in ExtractAlgorithmOptions()
2932 else if (fmt_choice == "asn") { in ExtractAlgorithmOptions()
2947 if (fmt_choice == "sam") { in ExtractAlgorithmOptions()
2950 else if (fmt_choice == "tabular") { in ExtractAlgorithmOptions()
2953 else if (fmt_choice == "fasta") { in ExtractAlgorithmOptions()
[all …]
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/blastinput/
H A Dblast_args.cpp2693 string fmt_choice = in ParseFormattingString() local
2697 custom_fmt_spec.assign(fmt_choice, pos+1, in ParseFormattingString()
2699 fmt_choice.erase(pos); in ParseFormattingString()
2719 try { val = NStr::StringToInt(fmt_choice); } in ParseFormattingString()
2926 if (fmt_choice == "sam") { in ExtractAlgorithmOptions()
2929 else if (fmt_choice == "tabular") { in ExtractAlgorithmOptions()
2932 else if (fmt_choice == "asn") { in ExtractAlgorithmOptions()
2947 if (fmt_choice == "sam") { in ExtractAlgorithmOptions()
2950 else if (fmt_choice == "tabular") { in ExtractAlgorithmOptions()
2953 else if (fmt_choice == "fasta") { in ExtractAlgorithmOptions()
[all …]