Searched refs:foundMate (Results 1 – 2 of 2) sorted by relevance
1939 foundMate = !oppFilt; in extendSeedsPaired()1944 if(foundMate) { in extendSeedsPaired()2010 if(foundMate) { in extendSeedsPaired()2026 if(foundMate) { in extendSeedsPaired()2082 if(!foundMate) { in extendSeedsPaired()2098 foundMate = false; in extendSeedsPaired()2112 if(foundMate) { in extendSeedsPaired()2132 if(foundMate && in extendSeedsPaired()2145 if(foundMate) { in extendSeedsPaired()2169 foundMate = false; in extendSeedsPaired()[all …]
2467 foundMate = !oppFilt; in extendSeedsPaired()2472 if(foundMate) { in extendSeedsPaired()2538 if(foundMate) { in extendSeedsPaired()2554 if(foundMate) { in extendSeedsPaired()2610 if(!foundMate) { in extendSeedsPaired()2626 foundMate = false; in extendSeedsPaired()2642 if(foundMate) { in extendSeedsPaired()2662 if(foundMate && in extendSeedsPaired()2675 if(foundMate) { in extendSeedsPaired()2699 foundMate = false; in extendSeedsPaired()[all …]