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Searched refs:fragment_list_t (Results 1 – 4 of 4) sorted by relevance

/dports/biology/subread/subread-2.0.2-source/src/
H A Dcore-bigtable.h41 void fraglist_init(fragment_list_t * list);
43 void fraglist_append(fragment_list_t * list, subread_read_number_t fragment_number);
45 void fraglist_destroy(fragment_list_t * list);
H A Dcore-bigtable.c350 void fraglist_init(fragment_list_t * list){ in fraglist_init()
351 memset(list, 0, sizeof(fragment_list_t)); in fraglist_init()
356 void fraglist_destroy(fragment_list_t * list){ in fraglist_destroy()
360 void fraglist_append(fragment_list_t * list, subread_read_number_t fragment_number){ in fraglist_append()
H A Dcore.h89 } fragment_list_t; typedef
577 fragment_list_t funky_list_A;
578 fragment_list_t funky_list_DE;
H A Dcore-junction.c5411 void print_frags(global_context_t * global_context, fragment_list_t * fls){ in print_frags()
5441 …, mapping_result_t * res_A1, mapping_result_t * res_A2, fragment_list_t * listB, fragment_list_t *… in find_translocation_BC_mates()
5571 …d int brkPno , unsigned int brkQno, unsigned int brkRno, fragment_list_t * fliB, fragment_list_t *… in breakpoint_PQR_supported()
5576 fragment_list_t * fli = isFliB?fliB:fliC; in breakpoint_PQR_supported()
5695 …ext, mapping_result_t * resA1, mapping_result_t * resA2, fragment_list_t * fliB, fragment_list_t *… in find_translocation_brk_PQR()
5947 fragment_list_t fli_STR_B, fli_STR_C, fli_INV_B, fli_INV_C; in finalise_translocations()